Gene : Cagra.0925s0047 C. grandiflora v1.1
Defline:  (1 of 4) 3.2.1.22 - Alpha-galactosidase / Melibiase Genomic Order:  47
Name:  ? Cagra.0925s0047 Secondary Identifier:  ? PAC:28917134
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-1301 Capsella grandiflora pathologic  
Cgrandiflora PWY-6527 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0047 0.5kb upstream 0.5kb upstream 3632 true Scaffold925: 165162-168793 Capsella grandiflora
Cagra.0925s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 165162-165661 Capsella grandiflora
Cagra.0925s0047 0.5kb downstream 0.5kb downstream 3632 true Scaffold925: 165662-169293 Capsella grandiflora
Cagra.0925s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 168794-169293 Capsella grandiflora
Cagra.0925s0047 1.0kb upstream 1.0kb upstream 4132 true Scaffold925: 164662-168793 Capsella grandiflora
Cagra.0925s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 164662-165661 Capsella grandiflora
Cagra.0925s0047 1.0kb downstream 1.0kb downstream 4132 true Scaffold925: 165662-169793 Capsella grandiflora
Cagra.0925s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 168794-169793 Capsella grandiflora
Cagra.0925s0047 2.0kb upstream 2.0kb upstream 5132 true Scaffold925: 163662-168793 Capsella grandiflora
Cagra.0925s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 163662-165661 Capsella grandiflora
Cagra.0925s0047 2.0kb downstream 2.0kb downstream 5132 true Scaffold925: 165662-170793 Capsella grandiflora
Cagra.0925s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 168794-170793 Capsella grandiflora
Cagra.0925s0047 5.0kb upstream 5.0kb upstream 8132 true Scaffold925: 160662-168793 Capsella grandiflora
Cagra.0925s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 160662-165661 Capsella grandiflora
Cagra.0925s0047 5.0kb downstream 5.0kb downstream 8132 true Scaffold925: 165662-173793 Capsella grandiflora
Cagra.0925s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 168794-173793 Capsella grandiflora
Cagra.0925s0047 10.0kb upstream 10.0kb upstream 13132 true Scaffold925: 155662-168793 Capsella grandiflora
Cagra.0925s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 155662-165661 Capsella grandiflora
Cagra.0925s0047 10.0kb downstream 10.0kb downstream 13132 true Scaffold925: 165662-178793 Capsella grandiflora
Cagra.0925s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 168794-178793 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368440 5261 Brassicaceae View MSA
123828305 5264 Brassicales-Malvales View MSA
124349365 5266 SBM View MSA
124247152 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain