Gene : Cagra.0925s0080 C. grandiflora v1.1
Defline:  (1 of 4) PTHR15672 - CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN Genomic Order:  80
Name:  ? Cagra.0925s0080 Secondary Identifier:  ? PAC:28917151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0080 0.5kb upstream 0.5kb upstream 2817 true Scaffold925: 282903-285719 Capsella grandiflora
Cagra.0925s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 282903-283402 Capsella grandiflora
Cagra.0925s0080 0.5kb downstream 0.5kb downstream 2817 true Scaffold925: 283403-286219 Capsella grandiflora
Cagra.0925s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 285720-286219 Capsella grandiflora
Cagra.0925s0080 1.0kb upstream 1.0kb upstream 3317 true Scaffold925: 282403-285719 Capsella grandiflora
Cagra.0925s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 282403-283402 Capsella grandiflora
Cagra.0925s0080 1.0kb downstream 1.0kb downstream 3317 true Scaffold925: 283403-286719 Capsella grandiflora
Cagra.0925s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 285720-286719 Capsella grandiflora
Cagra.0925s0080 2.0kb upstream 2.0kb upstream 4317 true Scaffold925: 281403-285719 Capsella grandiflora
Cagra.0925s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 281403-283402 Capsella grandiflora
Cagra.0925s0080 2.0kb downstream 2.0kb downstream 4317 true Scaffold925: 283403-287719 Capsella grandiflora
Cagra.0925s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 285720-287719 Capsella grandiflora
Cagra.0925s0080 5.0kb upstream 5.0kb upstream 7317 true Scaffold925: 278403-285719 Capsella grandiflora
Cagra.0925s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 278403-283402 Capsella grandiflora
Cagra.0925s0080 5.0kb downstream 5.0kb downstream 7317 true Scaffold925: 283403-290719 Capsella grandiflora
Cagra.0925s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 285720-290719 Capsella grandiflora
Cagra.0925s0080 10.0kb upstream 10.0kb upstream 12317 true Scaffold925: 273403-285719 Capsella grandiflora
Cagra.0925s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 273403-283402 Capsella grandiflora
Cagra.0925s0080 10.0kb downstream 10.0kb downstream 9578 true Scaffold925: 283403-292980 Capsella grandiflora
Cagra.0925s0080 10.0kb downstream 10.0kb downstream 7261 false Scaffold925: 285720-292980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361837 5261 Brassicaceae View MSA
123831794 5264 Brassicales-Malvales View MSA
124340288 5266 SBM View MSA
124241003 5268 Malvidae View MSA
124070671 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain