Gene : Cagra.0917s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13206 - UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN Genomic Order:  11
Name:  ? Cagra.0917s0011 Secondary Identifier:  ? PAC:28909310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0011 0.5kb upstream 0.5kb upstream 2197 true Scaffold917: 44939-47135 Capsella grandiflora
Cagra.0917s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 44939-45438 Capsella grandiflora
Cagra.0917s0011 0.5kb downstream 0.5kb downstream 2197 true Scaffold917: 45439-47635 Capsella grandiflora
Cagra.0917s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 47136-47635 Capsella grandiflora
Cagra.0917s0011 1.0kb upstream 1.0kb upstream 2697 true Scaffold917: 44439-47135 Capsella grandiflora
Cagra.0917s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 44439-45438 Capsella grandiflora
Cagra.0917s0011 1.0kb downstream 1.0kb downstream 2697 true Scaffold917: 45439-48135 Capsella grandiflora
Cagra.0917s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 47136-48135 Capsella grandiflora
Cagra.0917s0011 2.0kb upstream 2.0kb upstream 3697 true Scaffold917: 43439-47135 Capsella grandiflora
Cagra.0917s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 43439-45438 Capsella grandiflora
Cagra.0917s0011 2.0kb downstream 2.0kb downstream 3697 true Scaffold917: 45439-49135 Capsella grandiflora
Cagra.0917s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 47136-49135 Capsella grandiflora
Cagra.0917s0011 5.0kb upstream 5.0kb upstream 6697 true Scaffold917: 40439-47135 Capsella grandiflora
Cagra.0917s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold917: 40439-45438 Capsella grandiflora
Cagra.0917s0011 5.0kb downstream 5.0kb downstream 6697 true Scaffold917: 45439-52135 Capsella grandiflora
Cagra.0917s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 47136-52135 Capsella grandiflora
Cagra.0917s0011 10.0kb upstream 10.0kb upstream 11697 true Scaffold917: 35439-47135 Capsella grandiflora
Cagra.0917s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold917: 35439-45438 Capsella grandiflora
Cagra.0917s0011 10.0kb downstream 10.0kb downstream 11697 true Scaffold917: 45439-57135 Capsella grandiflora
Cagra.0917s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 47136-57135 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040943 5273 Angiosperm View MSA
122361274 5261 Brassicaceae View MSA
123830296 5264 Brassicales-Malvales View MSA
124341667 5266 SBM View MSA
124248333 5268 Malvidae View MSA
124050532 5270 Rosid View MSA
123739121 5271 Pentapetalae View MSA
122791558 5272 Eudicot View MSA
121344260 5274 Embryophyte View MSA
123423854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain