Gene : Cagra.0917s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31062:SF48 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 6-RELATED Genomic Order:  12
Name:  ? Cagra.0917s0012 Secondary Identifier:  ? PAC:28909337
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0012 0.5kb upstream 0.5kb upstream 1942 true Scaffold917: 48452-50393 Capsella grandiflora
Cagra.0917s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 49894-50393 Capsella grandiflora
Cagra.0917s0012 0.5kb downstream 0.5kb downstream 1942 true Scaffold917: 47952-49893 Capsella grandiflora
Cagra.0917s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 47952-48451 Capsella grandiflora
Cagra.0917s0012 1.0kb upstream 1.0kb upstream 2442 true Scaffold917: 48452-50893 Capsella grandiflora
Cagra.0917s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 49894-50893 Capsella grandiflora
Cagra.0917s0012 1.0kb downstream 1.0kb downstream 2442 true Scaffold917: 47452-49893 Capsella grandiflora
Cagra.0917s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 47452-48451 Capsella grandiflora
Cagra.0917s0012 2.0kb upstream 2.0kb upstream 3442 true Scaffold917: 48452-51893 Capsella grandiflora
Cagra.0917s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 49894-51893 Capsella grandiflora
Cagra.0917s0012 2.0kb downstream 2.0kb downstream 3442 true Scaffold917: 46452-49893 Capsella grandiflora
Cagra.0917s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 46452-48451 Capsella grandiflora
Cagra.0917s0012 5.0kb upstream 5.0kb upstream 6442 true Scaffold917: 48452-54893 Capsella grandiflora
Cagra.0917s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold917: 49894-54893 Capsella grandiflora
Cagra.0917s0012 5.0kb downstream 5.0kb downstream 6442 true Scaffold917: 43452-49893 Capsella grandiflora
Cagra.0917s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 43452-48451 Capsella grandiflora
Cagra.0917s0012 10.0kb upstream 10.0kb upstream 11442 true Scaffold917: 48452-59893 Capsella grandiflora
Cagra.0917s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold917: 49894-59893 Capsella grandiflora
Cagra.0917s0012 10.0kb downstream 10.0kb downstream 11442 true Scaffold917: 38452-49893 Capsella grandiflora
Cagra.0917s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 38452-48451 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365516 5261 Brassicaceae View MSA
123836721 5264 Brassicales-Malvales View MSA
124336614 5266 SBM View MSA
124240830 5268 Malvidae View MSA
124050307 5270 Rosid View MSA
123753126 5271 Pentapetalae View MSA
122793763 5272 Eudicot View MSA
122045227 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain