Gene : Cagra.0917s0069 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11921:SF23 - SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIAL Genomic Order:  69
Name:  ? Cagra.0917s0069 Secondary Identifier:  ? PAC:28909312
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-5690 Capsella grandiflora pathologic  
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0917s0069 0.5kb upstream 0.5kb upstream 1945 true Scaffold917: 305181-307125 Capsella grandiflora
Cagra.0917s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold917: 305181-305680 Capsella grandiflora
Cagra.0917s0069 0.5kb downstream 0.5kb downstream 1945 true Scaffold917: 305681-307625 Capsella grandiflora
Cagra.0917s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold917: 307126-307625 Capsella grandiflora
Cagra.0917s0069 1.0kb upstream 1.0kb upstream 2445 true Scaffold917: 304681-307125 Capsella grandiflora
Cagra.0917s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold917: 304681-305680 Capsella grandiflora
Cagra.0917s0069 1.0kb downstream 1.0kb downstream 2445 true Scaffold917: 305681-308125 Capsella grandiflora
Cagra.0917s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold917: 307126-308125 Capsella grandiflora
Cagra.0917s0069 2.0kb upstream 2.0kb upstream 3445 true Scaffold917: 303681-307125 Capsella grandiflora
Cagra.0917s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold917: 303681-305680 Capsella grandiflora
Cagra.0917s0069 2.0kb downstream 2.0kb downstream 3445 true Scaffold917: 305681-309125 Capsella grandiflora
Cagra.0917s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold917: 307126-309125 Capsella grandiflora
Cagra.0917s0069 5.0kb upstream 5.0kb upstream 6445 true Scaffold917: 300681-307125 Capsella grandiflora
Cagra.0917s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold917: 300681-305680 Capsella grandiflora
Cagra.0917s0069 5.0kb downstream 5.0kb downstream 6445 true Scaffold917: 305681-312125 Capsella grandiflora
Cagra.0917s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold917: 307126-312125 Capsella grandiflora
Cagra.0917s0069 10.0kb upstream 10.0kb upstream 11445 true Scaffold917: 295681-307125 Capsella grandiflora
Cagra.0917s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold917: 295681-305680 Capsella grandiflora
Cagra.0917s0069 10.0kb downstream 10.0kb downstream 11445 true Scaffold917: 305681-317125 Capsella grandiflora
Cagra.0917s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold917: 307126-317125 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360845 5261 Brassicaceae View MSA
123831796 5264 Brassicales-Malvales View MSA
124343953 5266 SBM View MSA
124244083 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain