Gene : Cagra.0897s0042 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10044:SF98 - DETERIN Genomic Order:  42
Name:  ? Cagra.0897s0042 Secondary Identifier:  ? PAC:28902840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0042 0.5kb upstream 0.5kb upstream 4280 true Scaffold897: 154266-158545 Capsella grandiflora
Cagra.0897s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 158046-158545 Capsella grandiflora
Cagra.0897s0042 0.5kb downstream 0.5kb downstream 4280 true Scaffold897: 153766-158045 Capsella grandiflora
Cagra.0897s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 153766-154265 Capsella grandiflora
Cagra.0897s0042 1.0kb upstream 1.0kb upstream 4780 true Scaffold897: 154266-159045 Capsella grandiflora
Cagra.0897s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 158046-159045 Capsella grandiflora
Cagra.0897s0042 1.0kb downstream 1.0kb downstream 4780 true Scaffold897: 153266-158045 Capsella grandiflora
Cagra.0897s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 153266-154265 Capsella grandiflora
Cagra.0897s0042 2.0kb upstream 2.0kb upstream 5780 true Scaffold897: 154266-160045 Capsella grandiflora
Cagra.0897s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 158046-160045 Capsella grandiflora
Cagra.0897s0042 2.0kb downstream 2.0kb downstream 5780 true Scaffold897: 152266-158045 Capsella grandiflora
Cagra.0897s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 152266-154265 Capsella grandiflora
Cagra.0897s0042 5.0kb upstream 5.0kb upstream 8780 true Scaffold897: 154266-163045 Capsella grandiflora
Cagra.0897s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 158046-163045 Capsella grandiflora
Cagra.0897s0042 5.0kb downstream 5.0kb downstream 8780 true Scaffold897: 149266-158045 Capsella grandiflora
Cagra.0897s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 149266-154265 Capsella grandiflora
Cagra.0897s0042 10.0kb upstream 10.0kb upstream 13780 true Scaffold897: 154266-168045 Capsella grandiflora
Cagra.0897s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold897: 158046-168045 Capsella grandiflora
Cagra.0897s0042 10.0kb downstream 10.0kb downstream 13780 true Scaffold897: 144266-158045 Capsella grandiflora
Cagra.0897s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 144266-154265 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374754 5261 Brassicaceae View MSA
123839322 5264 Brassicales-Malvales View MSA
124351408 5266 SBM View MSA
124254063 5268 Malvidae View MSA
124063927 5270 Rosid View MSA
123743659 5271 Pentapetalae View MSA
122789603 5272 Eudicot View MSA
122049733 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain