Protein Family : RING/U-box superfamily protein 123839322

Method ID:  5264 Method Name:  Brassicales-Malvales
Sequence Alignment:  View MSA Member Count:  20

20 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT4G03000 (1 of 1) KOG1853//KOG4172 - LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase A. thaliana TAIR10 3413   Chr4: 1324108-1327520
AT1G03365 (1 of 2) PTHR10044:SF98 - DETERIN A. thaliana TAIR10 3815   Chr1: 826569-830383
Thhalv10028432m.g (1 of 1) KOG1853 - LIS1-interacting protein NUDE E. salsugineum v1.0 3428   scaffold_3: 1469034-1472461
Thhalv10006805m.g (1 of 2) PTHR10044:SF98 - DETERIN E. salsugineum v1.0 3518   scaffold_5: 14795302-14798819
Gorai.005G056100 (1 of 3) PTHR10044:SF98 - DETERIN G. raimondii v2.1 4134   Chr05: 5701345-5705478
Gorai.008G006200 (1 of 3) PTHR10044:SF98 - DETERIN G. raimondii v2.1 4085   Chr08: 767962-772046
Thecc1EG004480 (1 of 2) PTHR10044:SF98 - DETERIN T. cacao v1.1 4634   scaffold_1: 31814969-31819602
Thecc1EG021082 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase T. cacao v1.1 6956   scaffold_4: 31557205-31564160
Araha.5052s0032 (1 of 2) PTHR10044:SF98 - DETERIN A. halleri v1.1 3606   Scaffold5052: 111837-115442
Araha.39079s0005 (1 of 1) KOG1853 - LIS1-interacting protein NUDE A. halleri v1.1 3460   Scaffold39079: 12200-15659
Cagra.0897s0042 (1 of 2) PTHR10044:SF98 - DETERIN C. grandiflora v1.1 3780   Scaffold897: 154266-158045
Cagra.2552s0027 (1 of 2) PTHR10044:SF98 - DETERIN C. grandiflora v1.1 3660   Scaffold2552: 85351-89010
Brara.I00195 (1 of 2) PTHR10044:SF98 - DETERIN B. rapa FPsc v1.3 2677   A09: 1138527-1141203
Brara.J00178 (1 of 2) PTHR10044:SF98 - DETERIN B. rapa FPsc v1.3 3545   A10: 945234-948778
Bostr.2983s0142 (1 of 2) PTHR10044:SF98 - DETERIN B. stricta v1.2 3449   Scaffold2983: 853991-857439
Bostr.26675s0414 (1 of 2) PTHR10044:SF98 - DETERIN B. stricta v1.2 3804   Scaffold26675: 2440125-2443928
AL6G49930 (1 of 1) KOG1937 - Uncharacterized conserved protein A. lyrata v2.1 3446   scaffold_6: 23333610-23337055
AL1G12890 (1 of 2) PTHR10044:SF98 - DETERIN A. lyrata v2.1 3548   scaffold_1: 991114-994661
Carub.0001s0249 (1 of 2) PTHR10044:SF98 - DETERIN C. rubella v1.1 3663   scaffold_1: 860907-864569
Carub.0006s3405 (1 of 2) PTHR10044:SF98 - DETERIN C. rubella v1.1 3021   scaffold_6: 15340322-15343342

20 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thecc1EG021082t1 T. cacao v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Araha.39079s0005.1.p A. halleri v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Cagra.2552s0027.1.p C. grandiflora v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Carub.0001s0249.1.p C. rubella v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
AT4G03000.1 A. thaliana TAIR10 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
AT1G03365.1 A. thaliana TAIR10 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Thhalv10028432m E. salsugineum v1.0 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Thhalv10006805m E. salsugineum v1.0 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Gorai.005G056100.1 G. raimondii v2.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Gorai.008G006200.1 G. raimondii v2.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Thecc1EG004480t1 T. cacao v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Araha.5052s0032.1.p A. halleri v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Cagra.0897s0042.1.p C. grandiflora v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Brara.I00195.1.p B. rapa FPsc v1.3 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Brara.J00178.1.p B. rapa FPsc v1.3 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Bostr.2983s0142.1.p B. stricta v1.2 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Bostr.26675s0414.1.p B. stricta v1.2 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
AL1G12890.t1 A. lyrata v2.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
AL6G49930.t1 A. lyrata v2.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales
Carub.0006s3405.1.p C. rubella v1.1 123839322 RING/U-box superfamily protein 2 5264 Brassicales-Malvales