Gene : Cagra.2552s0027 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10044:SF98 - DETERIN Genomic Order:  27
Name:  ? Cagra.2552s0027 Secondary Identifier:  ? PAC:28895090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2552s0027 0.5kb upstream 0.5kb upstream 4160 true Scaffold2552: 85351-89510 Capsella grandiflora
Cagra.2552s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2552: 89011-89510 Capsella grandiflora
Cagra.2552s0027 0.5kb downstream 0.5kb downstream 4160 true Scaffold2552: 84851-89010 Capsella grandiflora
Cagra.2552s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2552: 84851-85350 Capsella grandiflora
Cagra.2552s0027 1.0kb upstream 1.0kb upstream 4660 true Scaffold2552: 85351-90010 Capsella grandiflora
Cagra.2552s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2552: 89011-90010 Capsella grandiflora
Cagra.2552s0027 1.0kb downstream 1.0kb downstream 4660 true Scaffold2552: 84351-89010 Capsella grandiflora
Cagra.2552s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2552: 84351-85350 Capsella grandiflora
Cagra.2552s0027 2.0kb upstream 2.0kb upstream 5660 true Scaffold2552: 85351-91010 Capsella grandiflora
Cagra.2552s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2552: 89011-91010 Capsella grandiflora
Cagra.2552s0027 2.0kb downstream 2.0kb downstream 5660 true Scaffold2552: 83351-89010 Capsella grandiflora
Cagra.2552s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2552: 83351-85350 Capsella grandiflora
Cagra.2552s0027 5.0kb upstream 5.0kb upstream 8660 true Scaffold2552: 85351-94010 Capsella grandiflora
Cagra.2552s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold2552: 89011-94010 Capsella grandiflora
Cagra.2552s0027 5.0kb downstream 5.0kb downstream 8660 true Scaffold2552: 80351-89010 Capsella grandiflora
Cagra.2552s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2552: 80351-85350 Capsella grandiflora
Cagra.2552s0027 10.0kb upstream 10.0kb upstream 10721 true Scaffold2552: 85351-96071 Capsella grandiflora
Cagra.2552s0027 10.0kb upstream 10.0kb upstream 7061 false Scaffold2552: 89011-96071 Capsella grandiflora
Cagra.2552s0027 10.0kb downstream 10.0kb downstream 13660 true Scaffold2552: 75351-89010 Capsella grandiflora
Cagra.2552s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2552: 75351-85350 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362632 5261 Brassicaceae View MSA
123839322 5264 Brassicales-Malvales View MSA
124351408 5266 SBM View MSA
124254063 5268 Malvidae View MSA
124063927 5270 Rosid View MSA
123743659 5271 Pentapetalae View MSA
122789603 5272 Eudicot View MSA
122049733 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain