Gene : Cagra.1157s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12565:SF121 - TRANSCRIPTION FACTOR BHLH49 Genomic Order:  17
Name:  ? Cagra.1157s0017 Secondary Identifier:  ? PAC:28919318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0017 0.5kb upstream 0.5kb upstream 3532 true Scaffold1157: 83387-86918 Capsella grandiflora
Cagra.1157s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 83387-83886 Capsella grandiflora
Cagra.1157s0017 0.5kb downstream 0.5kb downstream 3532 true Scaffold1157: 83887-87418 Capsella grandiflora
Cagra.1157s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 86919-87418 Capsella grandiflora
Cagra.1157s0017 1.0kb upstream 1.0kb upstream 4032 true Scaffold1157: 82887-86918 Capsella grandiflora
Cagra.1157s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 82887-83886 Capsella grandiflora
Cagra.1157s0017 1.0kb downstream 1.0kb downstream 4032 true Scaffold1157: 83887-87918 Capsella grandiflora
Cagra.1157s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 86919-87918 Capsella grandiflora
Cagra.1157s0017 2.0kb upstream 2.0kb upstream 5032 true Scaffold1157: 81887-86918 Capsella grandiflora
Cagra.1157s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 81887-83886 Capsella grandiflora
Cagra.1157s0017 2.0kb downstream 2.0kb downstream 5032 true Scaffold1157: 83887-88918 Capsella grandiflora
Cagra.1157s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 86919-88918 Capsella grandiflora
Cagra.1157s0017 5.0kb upstream 5.0kb upstream 8032 true Scaffold1157: 78887-86918 Capsella grandiflora
Cagra.1157s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 78887-83886 Capsella grandiflora
Cagra.1157s0017 5.0kb downstream 5.0kb downstream 8032 true Scaffold1157: 83887-91918 Capsella grandiflora
Cagra.1157s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 86919-91918 Capsella grandiflora
Cagra.1157s0017 10.0kb upstream 10.0kb upstream 13032 true Scaffold1157: 73887-86918 Capsella grandiflora
Cagra.1157s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold1157: 73887-83886 Capsella grandiflora
Cagra.1157s0017 10.0kb downstream 10.0kb downstream 13032 true Scaffold1157: 83887-96918 Capsella grandiflora
Cagra.1157s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 86919-96918 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363982 5261 Brassicaceae View MSA
123831698 5264 Brassicales-Malvales View MSA
124341134 5266 SBM View MSA
124243545 5268 Malvidae View MSA
124064699 5270 Rosid View MSA
123741271 5271 Pentapetalae View MSA
122787397 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain