Gene : Cagra.1157s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Genomic Order:  23
Name:  ? Cagra.1157s0023 Secondary Identifier:  ? PAC:28919322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0023 0.5kb upstream 0.5kb upstream 2495 true Scaffold1157: 106943-109437 Capsella grandiflora
Cagra.1157s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 106943-107442 Capsella grandiflora
Cagra.1157s0023 0.5kb downstream 0.5kb downstream 2495 true Scaffold1157: 107443-109937 Capsella grandiflora
Cagra.1157s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 109438-109937 Capsella grandiflora
Cagra.1157s0023 1.0kb upstream 1.0kb upstream 2995 true Scaffold1157: 106443-109437 Capsella grandiflora
Cagra.1157s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 106443-107442 Capsella grandiflora
Cagra.1157s0023 1.0kb downstream 1.0kb downstream 2995 true Scaffold1157: 107443-110437 Capsella grandiflora
Cagra.1157s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 109438-110437 Capsella grandiflora
Cagra.1157s0023 2.0kb upstream 2.0kb upstream 3995 true Scaffold1157: 105443-109437 Capsella grandiflora
Cagra.1157s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 105443-107442 Capsella grandiflora
Cagra.1157s0023 2.0kb downstream 2.0kb downstream 3995 true Scaffold1157: 107443-111437 Capsella grandiflora
Cagra.1157s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 109438-111437 Capsella grandiflora
Cagra.1157s0023 5.0kb upstream 5.0kb upstream 6995 true Scaffold1157: 102443-109437 Capsella grandiflora
Cagra.1157s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 102443-107442 Capsella grandiflora
Cagra.1157s0023 5.0kb downstream 5.0kb downstream 6995 true Scaffold1157: 107443-114437 Capsella grandiflora
Cagra.1157s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 109438-114437 Capsella grandiflora
Cagra.1157s0023 10.0kb upstream 10.0kb upstream 11995 true Scaffold1157: 97443-109437 Capsella grandiflora
Cagra.1157s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold1157: 97443-107442 Capsella grandiflora
Cagra.1157s0023 10.0kb downstream 10.0kb downstream 11995 true Scaffold1157: 107443-119437 Capsella grandiflora
Cagra.1157s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 109438-119437 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370999 5261 Brassicaceae View MSA
123840262 5264 Brassicales-Malvales View MSA
124341799 5266 SBM View MSA
124253716 5268 Malvidae View MSA
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain