Gene : Cagra.1189s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Genomic Order:  7
Name:  ? Cagra.1189s0007 Secondary Identifier:  ? PAC:28908959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0007 0.5kb upstream 0.5kb upstream 3203 true Scaffold1189: 18378-21580 Capsella grandiflora
Cagra.1189s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 18378-18877 Capsella grandiflora
Cagra.1189s0007 0.5kb downstream 0.5kb downstream 3203 true Scaffold1189: 18878-22080 Capsella grandiflora
Cagra.1189s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 21581-22080 Capsella grandiflora
Cagra.1189s0007 1.0kb upstream 1.0kb upstream 3703 true Scaffold1189: 17878-21580 Capsella grandiflora
Cagra.1189s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 17878-18877 Capsella grandiflora
Cagra.1189s0007 1.0kb downstream 1.0kb downstream 3703 true Scaffold1189: 18878-22580 Capsella grandiflora
Cagra.1189s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 21581-22580 Capsella grandiflora
Cagra.1189s0007 2.0kb upstream 2.0kb upstream 4703 true Scaffold1189: 16878-21580 Capsella grandiflora
Cagra.1189s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 16878-18877 Capsella grandiflora
Cagra.1189s0007 2.0kb downstream 2.0kb downstream 4703 true Scaffold1189: 18878-23580 Capsella grandiflora
Cagra.1189s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 21581-23580 Capsella grandiflora
Cagra.1189s0007 5.0kb upstream 5.0kb upstream 7703 true Scaffold1189: 13878-21580 Capsella grandiflora
Cagra.1189s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 13878-18877 Capsella grandiflora
Cagra.1189s0007 5.0kb downstream 5.0kb downstream 7703 true Scaffold1189: 18878-26580 Capsella grandiflora
Cagra.1189s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 21581-26580 Capsella grandiflora
Cagra.1189s0007 10.0kb upstream 10.0kb upstream 12703 true Scaffold1189: 8878-21580 Capsella grandiflora
Cagra.1189s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 8878-18877 Capsella grandiflora
Cagra.1189s0007 10.0kb downstream 10.0kb downstream 12703 true Scaffold1189: 18878-31580 Capsella grandiflora
Cagra.1189s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 21581-31580 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361310 5261 Brassicaceae View MSA
123798136 5264 Brassicales-Malvales View MSA
124295811 5266 SBM View MSA
124249988 5268 Malvidae View MSA
124062344 5270 Rosid View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain