Gene : Cagra.1148s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Genomic Order:  9
Name:  ? Cagra.1148s0009 Secondary Identifier:  ? PAC:28913221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1148s0009 0.5kb upstream 0.5kb upstream 2656 true Scaffold1148: 42121-44776 Capsella grandiflora
Cagra.1148s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1148: 42121-42620 Capsella grandiflora
Cagra.1148s0009 0.5kb downstream 0.5kb downstream 2656 true Scaffold1148: 42621-45276 Capsella grandiflora
Cagra.1148s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1148: 44777-45276 Capsella grandiflora
Cagra.1148s0009 1.0kb upstream 1.0kb upstream 3156 true Scaffold1148: 41621-44776 Capsella grandiflora
Cagra.1148s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1148: 41621-42620 Capsella grandiflora
Cagra.1148s0009 1.0kb downstream 1.0kb downstream 3156 true Scaffold1148: 42621-45776 Capsella grandiflora
Cagra.1148s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1148: 44777-45776 Capsella grandiflora
Cagra.1148s0009 2.0kb upstream 2.0kb upstream 4156 true Scaffold1148: 40621-44776 Capsella grandiflora
Cagra.1148s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1148: 40621-42620 Capsella grandiflora
Cagra.1148s0009 2.0kb downstream 2.0kb downstream 4156 true Scaffold1148: 42621-46776 Capsella grandiflora
Cagra.1148s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1148: 44777-46776 Capsella grandiflora
Cagra.1148s0009 5.0kb upstream 5.0kb upstream 7156 true Scaffold1148: 37621-44776 Capsella grandiflora
Cagra.1148s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1148: 37621-42620 Capsella grandiflora
Cagra.1148s0009 5.0kb downstream 5.0kb downstream 7156 true Scaffold1148: 42621-49776 Capsella grandiflora
Cagra.1148s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1148: 44777-49776 Capsella grandiflora
Cagra.1148s0009 10.0kb upstream 10.0kb upstream 12156 true Scaffold1148: 32621-44776 Capsella grandiflora
Cagra.1148s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1148: 32621-42620 Capsella grandiflora
Cagra.1148s0009 10.0kb downstream 10.0kb downstream 12156 true Scaffold1148: 42621-54776 Capsella grandiflora
Cagra.1148s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1148: 44777-54776 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373933 5261 Brassicaceae View MSA
123834082 5264 Brassicales-Malvales View MSA
124321920 5266 SBM View MSA
124241384 5268 Malvidae View MSA
124068966 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain