Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 121351304

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  301

301 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29706.t000078 (1 of 1) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN R. communis v0.1 2651   29706: 658014-660664
30170.t000083 (1 of 3) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 R. communis v0.1 1424   30170: 472089-473512
29629.t000076 (1 of 3) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 R. communis v0.1 2546   29629: 464143-466688
Cucsa.340040 (1 of 2) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN C. sativus v1.0 3171   scaffold03356: 2571008-2574178
Cucsa.240780 (1 of 1) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 C. sativus v1.0 2174   scaffold02047: 934734-936907
Cucsa.360490 (1 of 2) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN C. sativus v1.0 2460   scaffold03588: 1136536-1138995
AT5G40490 (1 of 1) PTHR24012//PTHR24012:SF426 - FAMILY NOT NAMED // RNA-BINDING PROTEIN-RELATED A. thaliana TAIR10 2334   Chr5: 16225376-16227709
AT3G13224 (1 of 1) KOG0131//KOG4205 - Splicing factor 3b, subunit 4 // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 A. thaliana TAIR10 2667   Chr3: 4254743-4257409
AT1G58470 (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 A. thaliana TAIR10 RBP1 1737   Chr1: 21727024-21728760
AT1G17640 (1 of 1) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN A. thaliana TAIR10 1705   Chr1: 6067394-6069098
Thhalv10021050m.g (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 E. salsugineum v1.0 2505   scaffold_13: 5114431-5116935
Thhalv10007978m.g (1 of 1) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN E. salsugineum v1.0 2292   scaffold_5: 9433780-9436071
Thhalv10024023m.g (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 E. salsugineum v1.0 1292   scaffold_8: 6039822-6041113
Ciclev10009293m.g (1 of 1) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 C. clementina v1.0 3287   scaffold_1: 23722928-23726214
Lus10032595.g (1 of 4) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 L. usitatissimum v1.0 1930   scaffold140: 928840-930769
Lus10043154.g (1 of 4) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 L. usitatissimum v1.0 1935   scaffold25: 1479013-1480947
Lus10032124.g (1 of 4) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 L. usitatissimum v1.0 2540   scaffold42: 996516-999055
Lus10018657.g (1 of 26) KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 L. usitatissimum v1.0 1520   scaffold461: 41716-43235
Lus10007721.g (1 of 1) KOG0131//KOG0149 - Splicing factor 3b, subunit 4 // Predicted RNA-binding protein SEB4 (RRM superfamily) L. usitatissimum v1.0 2432   scaffold993: 54056-56487
Lus10014562.g (1 of 1) PTHR24012:SF426 - RNA-BINDING PROTEIN-RELATED L. usitatissimum v1.0 2521   scaffold107: 308244-310764
Gorai.001G098600 (1 of 4) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN G. raimondii v2.1 3497   Chr01: 11089609-11093105
Gorai.010G027900 (1 of 3) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 G. raimondii v2.1 2400   Chr10: 2242040-2244439
Gorai.006G034100 (1 of 4) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN G. raimondii v2.1 2900   Chr06: 9011445-9014344
Thecc1EG000842 (1 of 1) KOG0148//KOG0149 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // Predicted RNA-binding protein SEB4 (RRM superfamily) T. cacao v1.1 4762   scaffold_1: 3734342-3739103
Thecc1EG002445 (1 of 1) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN T. cacao v1.1 3703   scaffold_1: 13943429-13947131
Thecc1EG016971 (1 of 7) K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) T. cacao v1.1 7831   scaffold_4: 1165912-1173742
Thecc1EG030592 (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 T. cacao v1.1 3115   scaffold_7: 451582-454696
Thecc1EG034654 (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 T. cacao v1.1 3508   scaffold_8: 4146919-4150426
Migut.D02093 (1 of 2) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN M. guttatus v2.0 3362   scaffold_4: 17954189-17957550
Migut.E00986 (1 of 15) KOG0148 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) M. guttatus v2.0 1169   scaffold_5: 11829917-11831085

301 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29629.m001425 R. communis v0.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
29706.m001348 R. communis v0.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
30170.m013671 R. communis v0.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Cucsa.340040.1 C. sativus v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Cucsa.360490.1 C. sativus v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Cucsa.240780.1 C. sativus v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
AT1G58470.1 A. thaliana TAIR10 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
AT5G40490.1 A. thaliana TAIR10 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
AT3G13224.2 A. thaliana TAIR10 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
AT1G17640.1 A. thaliana TAIR10 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5274 Embryophyte
Thhalv10021050m E. salsugineum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Thhalv10007978m E. salsugineum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Thhalv10024023m E. salsugineum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Ciclev10009293m C. clementina v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5274 Embryophyte
Lus10018657 L. usitatissimum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Lus10014562 L. usitatissimum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Lus10043154 L. usitatissimum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Lus10032124 L. usitatissimum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Lus10007721 L. usitatissimum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Lus10032595 L. usitatissimum v1.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Gorai.010G027900.1 G. raimondii v2.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Gorai.006G034100.1 G. raimondii v2.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Gorai.001G098600.1 G. raimondii v2.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Thecc1EG016971t1 T. cacao v1.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Thecc1EG034654t1 T. cacao v1.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Thecc1EG000842t1 T. cacao v1.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Thecc1EG002445t2 T. cacao v1.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Thecc1EG030592t1 T. cacao v1.1 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Migut.E00986.1.p M. guttatus v2.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte
Migut.D02093.1.p M. guttatus v2.0 121351304 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5274 Embryophyte