Gene : RBP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G58470 Defline:  (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23
Genomic Order:  4827 Name:  ? AT1G58470
Secondary Identifier:  ? PAC:19654569
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G58470 0.5kb upstream 0.5kb upstream 2237 true Chr1: 21726524-21728760 Arabidopsis thaliana
AT1G58470 0.5kb upstream 0.5kb upstream 500 false Chr1: 21726524-21727023 Arabidopsis thaliana
AT1G58470 0.5kb downstream 0.5kb downstream 2237 true Chr1: 21727024-21729260 Arabidopsis thaliana
AT1G58470 0.5kb downstream 0.5kb downstream 500 false Chr1: 21728761-21729260 Arabidopsis thaliana
AT1G58470 1.0kb upstream 1.0kb upstream 2737 true Chr1: 21726024-21728760 Arabidopsis thaliana
AT1G58470 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21726024-21727023 Arabidopsis thaliana
AT1G58470 1.0kb downstream 1.0kb downstream 2737 true Chr1: 21727024-21729760 Arabidopsis thaliana
AT1G58470 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21728761-21729760 Arabidopsis thaliana
AT1G58470 2.0kb upstream 2.0kb upstream 3737 true Chr1: 21725024-21728760 Arabidopsis thaliana
AT1G58470 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21725024-21727023 Arabidopsis thaliana
AT1G58470 2.0kb downstream 2.0kb downstream 3737 true Chr1: 21727024-21730760 Arabidopsis thaliana
AT1G58470 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21728761-21730760 Arabidopsis thaliana
AT1G58470 5.0kb upstream 5.0kb upstream 6737 true Chr1: 21722024-21728760 Arabidopsis thaliana
AT1G58470 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21722024-21727023 Arabidopsis thaliana
AT1G58470 5.0kb downstream 5.0kb downstream 6737 true Chr1: 21727024-21733760 Arabidopsis thaliana
AT1G58470 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21728761-21733760 Arabidopsis thaliana
AT1G58470 10.0kb upstream 10.0kb upstream 11737 true Chr1: 21717024-21728760 Arabidopsis thaliana
AT1G58470 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21717024-21727023 Arabidopsis thaliana
AT1G58470 10.0kb downstream 10.0kb downstream 11737 true Chr1: 21727024-21738760 Arabidopsis thaliana
AT1G58470 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21728761-21738760 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361334 5261 Brassicaceae View MSA
123828240 5264 Brassicales-Malvales View MSA
124321519 5266 SBM View MSA
124241722 5268 Malvidae View MSA
124072663 5270 Rosid View MSA
123742464 5271 Pentapetalae View MSA
122794211 5272 Eudicot View MSA
122048542 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.455        
cufflinks 3.907        
cufflinks 2.345       Low
cufflinks 5.083       High
cufflinks 2.698        
cufflinks 4.335        

0 Strain