Protein Family : RNA-binding protein 1 124072663

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  32
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32 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000083 (1 of 3) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 R. communis v0.1 1424   30170: 472089-473512
AT1G58470 (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 A. thaliana TAIR10 RBP1 1737   Chr1: 21727024-21728760
Thhalv10024023m.g (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 E. salsugineum v1.0 1292   scaffold_8: 6039822-6041113
Lus10018657.g (1 of 26) KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 L. usitatissimum v1.0 1520   scaffold461: 41716-43235
Lus10007721.g (1 of 1) KOG0131//KOG0149 - Splicing factor 3b, subunit 4 // Predicted RNA-binding protein SEB4 (RRM superfamily) L. usitatissimum v1.0 2432   scaffold993: 54056-56487
Gorai.010G027900 (1 of 3) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 G. raimondii v2.1 2400   Chr10: 2242040-2244439
Thecc1EG034654 (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 T. cacao v1.1 3508   scaffold_8: 4146919-4150426
Araha.2985s0004 (1 of 9) KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 A. halleri v1.1 1770   Scaffold2985: 29588-31357
Cagra.6704s0003 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 C. grandiflora v1.1 1828   Scaffold6704: 11622-13449
Glyma.06G049000 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 G. max Wm82.a2.v1 2528   Chr06: 3676915-3679442
Glyma.04G047800 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 G. max Wm82.a2.v1 2218   Chr04: 3840781-3842998
Brara.I01670 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 B. rapa FPsc v1.3 1379   A09: 11372109-11373487
Bostr.10040s0316 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 B. stricta v1.2 1793   Scaffold10040: 2940762-2942554
Medtr3g103420 (1 of 1) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 M. truncatula Mt4.0v1 1768   chr3: 47715877-47717644
SapurV1A.0235s0310 (1 of 4) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 S. purpurea v1.0 2581   chr14: 427669-430249
SapurV1A.3102s0010 (1 of 4) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 S. purpurea v1.0 1958   Scaffold3102: 1375-3332
SapurV1A.0004s0250 (1 of 4) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 S. purpurea v1.0 1954   chr02: 9214007-9215960
Eucgr.F02224 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 E. grandis v2.0 1424   Chr06: 33147573-33148996
Prupe.1G418900 (1 of 11) KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 P. persica v2.1 2070   Pp01: 36293541-36295610
Manes.18G049700 (1 of 3) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 M. esculenta v6.1 2152   Chromosome18: 4161345-4163496
AL2G17740 (1 of 1) KOG0131//KOG0146//KOG0148//KOG0149 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // Predicted RNA-binding protein SEB4 (RRM superfamily) A. lyrata v2.1 1814   scaffold_2: 4096018-4097831
Tp57577_TGAC_v2_gene20533 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 T. pratense v2 2128   Tp57577_TGAC_v2_scaf_3276: 1156-3283
Phvul.009G074200 (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 P. vulgaris v2.1 1597   Chr09: 12663025-12664621
Potri.002G115000 (1 of 3) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 P. trichocarpa v3.1 2750   Chr02: 8670541-8673290
Potri.014G012700 (1 of 3) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 P. trichocarpa v3.1 2082   Chr14: 1313962-1316043
Podel.14G011900 (1 of 4) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 P. deltoides WV94 v2.1 1962   Chr14: 908473-910434
Podel.02G125700 (1 of 4) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 P. deltoides WV94 v2.1 1843   Chr02: 9564252-9566094
VIT_218s0001g08640 (1 of 3) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 V. vinifera v2.1 1735   chr18: 7074870-7076604
Carub.0002s0604 (1 of 2) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 C. rubella v1.1 1846   scaffold_2: 2608725-2610570
MD15G1064900 (1 of 4) PTHR24012//PTHR24012:SF478 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 M. domestica v1.1 1846   Chr15: 4509816-4511661

32 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30170.m013671 R. communis v0.1 124072663 RNA-binding protein 1 1 5270 Rosid
Lus10018657 L. usitatissimum v1.0 124072663 RNA-binding protein 1 2 5270 Rosid
Araha.2985s0004.1.p A. halleri v1.1 124072663 RNA-binding protein 1 1 5270 Rosid
Medtr3g103420.1 M. truncatula Mt4.0v1 124072663 RNA-binding protein 1 1 5270 Rosid
SapurV1A.0235s0310.1.p S. purpurea v1.0 124072663 RNA-binding protein 1 3 5270 Rosid
Eucgr.F02224.1.p E. grandis v2.0 124072663 RNA-binding protein 1 1 5270 Rosid
Tp57577_TGAC_v2_mRNA21239 T. pratense v2 124072663 RNA-binding protein 1 1 5270 Rosid
Potri.014G012700.1.p P. trichocarpa v3.1 124072663 RNA-binding protein 1 2 5270 Rosid
Podel.14G011900.1.p P. deltoides WV94 v2.1 124072663 RNA-binding protein 1 2 5270 Rosid
Podel.02G125700.1.p P. deltoides WV94 v2.1 124072663 RNA-binding protein 1 2 5270 Rosid
Carub.0002s0604.1.p C. rubella v1.1 124072663 RNA-binding protein 1 1 5270 Rosid
MD15G1064900 M. domestica v1.1 124072663 RNA-binding protein 1 1 5270 Rosid
Ca_01609 C. arietinum v1.0 124072663 RNA-binding protein 1 1 5270 Rosid
AT1G58470.1 A. thaliana TAIR10 124072663 RNA-binding protein 1 1 5270 Rosid
Thhalv10024023m E. salsugineum v1.0 124072663 RNA-binding protein 1 1 5270 Rosid
Lus10007721 L. usitatissimum v1.0 124072663 RNA-binding protein 1 2 5270 Rosid
Gorai.010G027900.1 G. raimondii v2.1 124072663 RNA-binding protein 1 1 5270 Rosid
Thecc1EG034654t1 T. cacao v1.1 124072663 RNA-binding protein 1 1 5270 Rosid
Cagra.6704s0003.1.p C. grandiflora v1.1 124072663 RNA-binding protein 1 1 5270 Rosid
Glyma.04G047800.1.p G. max Wm82.a2.v1 124072663 RNA-binding protein 1 2 5270 Rosid
Glyma.06G049000.1.p G. max Wm82.a2.v1 124072663 RNA-binding protein 1 2 5270 Rosid
Brara.I01670.1.p B. rapa FPsc v1.3 124072663 RNA-binding protein 1 1 5270 Rosid
Bostr.10040s0316.1.p B. stricta v1.2 124072663 RNA-binding protein 1 1 5270 Rosid
SapurV1A.0004s0250.1.p S. purpurea v1.0 124072663 RNA-binding protein 1 3 5270 Rosid
SapurV1A.3102s0010.1.p S. purpurea v1.0 124072663 RNA-binding protein 1 3 5270 Rosid
Prupe.1G418900.1.p P. persica v2.1 124072663 RNA-binding protein 1 1 5270 Rosid
Manes.18G049700.1.p M. esculenta v6.1 124072663 RNA-binding protein 1 1 5270 Rosid
AL2G17740.t1 A. lyrata v2.1 124072663 RNA-binding protein 1 1 5270 Rosid
Phvul.009G074200.1.p P. vulgaris v2.1 124072663 RNA-binding protein 1 1 5270 Rosid
Potri.002G115000.2.p P. trichocarpa v3.1 124072663 RNA-binding protein 1 2 5270 Rosid