Gene : Cagra.6704s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 Genomic Order:  3
Name:  ? Cagra.6704s0003 Secondary Identifier:  ? PAC:28908832
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6704s0003 0.5kb upstream 0.5kb upstream 2328 true Scaffold6704: 11622-13949 Capsella grandiflora
Cagra.6704s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6704: 13450-13949 Capsella grandiflora
Cagra.6704s0003 0.5kb downstream 0.5kb downstream 2328 true Scaffold6704: 11122-13449 Capsella grandiflora
Cagra.6704s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6704: 11122-11621 Capsella grandiflora
Cagra.6704s0003 1.0kb upstream 1.0kb upstream 2828 true Scaffold6704: 11622-14449 Capsella grandiflora
Cagra.6704s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6704: 13450-14449 Capsella grandiflora
Cagra.6704s0003 1.0kb downstream 1.0kb downstream 2828 true Scaffold6704: 10622-13449 Capsella grandiflora
Cagra.6704s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6704: 10622-11621 Capsella grandiflora
Cagra.6704s0003 2.0kb upstream 2.0kb upstream 3828 true Scaffold6704: 11622-15449 Capsella grandiflora
Cagra.6704s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6704: 13450-15449 Capsella grandiflora
Cagra.6704s0003 2.0kb downstream 2.0kb downstream 3828 true Scaffold6704: 9622-13449 Capsella grandiflora
Cagra.6704s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6704: 9622-11621 Capsella grandiflora
Cagra.6704s0003 5.0kb upstream 5.0kb upstream 6828 true Scaffold6704: 11622-18449 Capsella grandiflora
Cagra.6704s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6704: 13450-18449 Capsella grandiflora
Cagra.6704s0003 5.0kb downstream 5.0kb downstream 6828 true Scaffold6704: 6622-13449 Capsella grandiflora
Cagra.6704s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6704: 6622-11621 Capsella grandiflora
Cagra.6704s0003 10.0kb upstream 10.0kb upstream 11828 true Scaffold6704: 11622-23449 Capsella grandiflora
Cagra.6704s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold6704: 13450-23449 Capsella grandiflora
Cagra.6704s0003 10.0kb downstream 10.0kb downstream 11828 true Scaffold6704: 1622-13449 Capsella grandiflora
Cagra.6704s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6704: 1622-11621 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361334 5261 Brassicaceae View MSA
123828240 5264 Brassicales-Malvales View MSA
124321519 5266 SBM View MSA
124241722 5268 Malvidae View MSA
124072663 5270 Rosid View MSA
123742464 5271 Pentapetalae View MSA
122794211 5272 Eudicot View MSA
122048542 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain