Gene : Medtr3g103420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24012:SF478 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23 Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  5692 Name:  ? Medtr3g103420
Secondary Identifier:  ? PAC:31054717
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g103420 0.5kb upstream 0.5kb upstream 2268 true chr3: 47715377-47717644 Medicago truncatula
Medtr3g103420 0.5kb upstream 0.5kb upstream 500 false chr3: 47715377-47715876 Medicago truncatula
Medtr3g103420 0.5kb downstream 0.5kb downstream 2268 true chr3: 47715877-47718144 Medicago truncatula
Medtr3g103420 0.5kb downstream 0.5kb downstream 500 false chr3: 47717645-47718144 Medicago truncatula
Medtr3g103420 1.0kb upstream 1.0kb upstream 2768 true chr3: 47714877-47717644 Medicago truncatula
Medtr3g103420 1.0kb upstream 1.0kb upstream 1000 false chr3: 47714877-47715876 Medicago truncatula
Medtr3g103420 1.0kb downstream 1.0kb downstream 2768 true chr3: 47715877-47718644 Medicago truncatula
Medtr3g103420 1.0kb downstream 1.0kb downstream 1000 false chr3: 47717645-47718644 Medicago truncatula
Medtr3g103420 2.0kb upstream 2.0kb upstream 3768 true chr3: 47713877-47717644 Medicago truncatula
Medtr3g103420 2.0kb upstream 2.0kb upstream 2000 false chr3: 47713877-47715876 Medicago truncatula
Medtr3g103420 2.0kb downstream 2.0kb downstream 3768 true chr3: 47715877-47719644 Medicago truncatula
Medtr3g103420 2.0kb downstream 2.0kb downstream 2000 false chr3: 47717645-47719644 Medicago truncatula
Medtr3g103420 5.0kb upstream 5.0kb upstream 6768 true chr3: 47710877-47717644 Medicago truncatula
Medtr3g103420 5.0kb upstream 5.0kb upstream 5000 false chr3: 47710877-47715876 Medicago truncatula
Medtr3g103420 5.0kb downstream 5.0kb downstream 6768 true chr3: 47715877-47722644 Medicago truncatula
Medtr3g103420 5.0kb downstream 5.0kb downstream 5000 false chr3: 47717645-47722644 Medicago truncatula
Medtr3g103420 10.0kb upstream 10.0kb upstream 11768 true chr3: 47705877-47717644 Medicago truncatula
Medtr3g103420 10.0kb upstream 10.0kb upstream 10000 false chr3: 47705877-47715876 Medicago truncatula
Medtr3g103420 10.0kb downstream 10.0kb downstream 11768 true chr3: 47715877-47727644 Medicago truncatula
Medtr3g103420 10.0kb downstream 10.0kb downstream 10000 false chr3: 47717645-47727644 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301715 5265 Fabidae View MSA
124072663 5270 Rosid View MSA
123742464 5271 Pentapetalae View MSA
122794211 5272 Eudicot View MSA
122048542 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.582       Low
cufflinks 3.272        
cufflinks 3.327        
cufflinks 4.421       High
cufflinks 4.539       High
cufflinks 2.811        
cufflinks 3.926        
cufflinks 3.153        
cufflinks 3.083        

0 Strain