Gene : Cagra.1148s0015 C. grandiflora v1.1
Defline:  (1 of 2) KOG3038 - Histone acetyltransferase SAGA associated factor SGF29 Genomic Order:  15
Name:  ? Cagra.1148s0015 Secondary Identifier:  ? PAC:28913241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1148s0015 0.5kb upstream 0.5kb upstream 3183 true Scaffold1148: 57694-60876 Capsella grandiflora
Cagra.1148s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1148: 57694-58193 Capsella grandiflora
Cagra.1148s0015 0.5kb downstream 0.5kb downstream 3183 true Scaffold1148: 58194-61376 Capsella grandiflora
Cagra.1148s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1148: 60877-61376 Capsella grandiflora
Cagra.1148s0015 1.0kb upstream 1.0kb upstream 3683 true Scaffold1148: 57194-60876 Capsella grandiflora
Cagra.1148s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1148: 57194-58193 Capsella grandiflora
Cagra.1148s0015 1.0kb downstream 1.0kb downstream 3683 true Scaffold1148: 58194-61876 Capsella grandiflora
Cagra.1148s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1148: 60877-61876 Capsella grandiflora
Cagra.1148s0015 2.0kb upstream 2.0kb upstream 4683 true Scaffold1148: 56194-60876 Capsella grandiflora
Cagra.1148s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1148: 56194-58193 Capsella grandiflora
Cagra.1148s0015 2.0kb downstream 2.0kb downstream 4683 true Scaffold1148: 58194-62876 Capsella grandiflora
Cagra.1148s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1148: 60877-62876 Capsella grandiflora
Cagra.1148s0015 5.0kb upstream 5.0kb upstream 7683 true Scaffold1148: 53194-60876 Capsella grandiflora
Cagra.1148s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1148: 53194-58193 Capsella grandiflora
Cagra.1148s0015 5.0kb downstream 5.0kb downstream 7683 true Scaffold1148: 58194-65876 Capsella grandiflora
Cagra.1148s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1148: 60877-65876 Capsella grandiflora
Cagra.1148s0015 10.0kb upstream 10.0kb upstream 12683 true Scaffold1148: 48194-60876 Capsella grandiflora
Cagra.1148s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1148: 48194-58193 Capsella grandiflora
Cagra.1148s0015 10.0kb downstream 10.0kb downstream 12683 true Scaffold1148: 58194-70876 Capsella grandiflora
Cagra.1148s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1148: 60877-70876 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361261 5261 Brassicaceae View MSA
123830451 5264 Brassicales-Malvales View MSA
124343013 5266 SBM View MSA
124254161 5268 Malvidae View MSA
124061243 5270 Rosid View MSA
123747151 5271 Pentapetalae View MSA
122789901 5272 Eudicot View MSA
122042873 5273 Angiosperm View MSA
121345271 5274 Embryophyte View MSA
123380184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain