Gene : Cagra.1111s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12547:SF60 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14-RELATED Genomic Order:  13
Name:  ? Cagra.1111s0013 Secondary Identifier:  ? PAC:28918340
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1111s0013 0.5kb upstream 0.5kb upstream 2844 true Scaffold1111: 47581-50424 Capsella grandiflora
Cagra.1111s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1111: 47581-48080 Capsella grandiflora
Cagra.1111s0013 0.5kb downstream 0.5kb downstream 2844 true Scaffold1111: 48081-50924 Capsella grandiflora
Cagra.1111s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1111: 50425-50924 Capsella grandiflora
Cagra.1111s0013 1.0kb upstream 1.0kb upstream 3344 true Scaffold1111: 47081-50424 Capsella grandiflora
Cagra.1111s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1111: 47081-48080 Capsella grandiflora
Cagra.1111s0013 1.0kb downstream 1.0kb downstream 3344 true Scaffold1111: 48081-51424 Capsella grandiflora
Cagra.1111s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1111: 50425-51424 Capsella grandiflora
Cagra.1111s0013 2.0kb upstream 2.0kb upstream 4344 true Scaffold1111: 46081-50424 Capsella grandiflora
Cagra.1111s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1111: 46081-48080 Capsella grandiflora
Cagra.1111s0013 2.0kb downstream 2.0kb downstream 4344 true Scaffold1111: 48081-52424 Capsella grandiflora
Cagra.1111s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1111: 50425-52424 Capsella grandiflora
Cagra.1111s0013 5.0kb upstream 5.0kb upstream 7344 true Scaffold1111: 43081-50424 Capsella grandiflora
Cagra.1111s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1111: 43081-48080 Capsella grandiflora
Cagra.1111s0013 5.0kb downstream 5.0kb downstream 7344 true Scaffold1111: 48081-55424 Capsella grandiflora
Cagra.1111s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1111: 50425-55424 Capsella grandiflora
Cagra.1111s0013 10.0kb upstream 10.0kb upstream 12344 true Scaffold1111: 38081-50424 Capsella grandiflora
Cagra.1111s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1111: 38081-48080 Capsella grandiflora
Cagra.1111s0013 10.0kb downstream 10.0kb downstream 12344 true Scaffold1111: 48081-60424 Capsella grandiflora
Cagra.1111s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1111: 50425-60424 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369889 5261 Brassicaceae View MSA
123835441 5264 Brassicales-Malvales View MSA
124338168 5266 SBM View MSA
124237270 5268 Malvidae View MSA
124071931 5270 Rosid View MSA
123741558 5271 Pentapetalae View MSA
122789151 5272 Eudicot View MSA
122047448 5273 Angiosperm View MSA
121350535 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain