Gene : Cagra.1085s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30620:SF19 - BETA-D-XYLOSIDASE 6-RELATED Genomic Order:  3
Name:  ? Cagra.1085s0003 Secondary Identifier:  ? PAC:28900611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0003 0.5kb upstream 0.5kb upstream 4184 true Scaffold1085: 9898-14081 Capsella grandiflora
Cagra.1085s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 9898-10397 Capsella grandiflora
Cagra.1085s0003 0.5kb downstream 0.5kb downstream 4184 true Scaffold1085: 10398-14581 Capsella grandiflora
Cagra.1085s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 14082-14581 Capsella grandiflora
Cagra.1085s0003 1.0kb upstream 1.0kb upstream 4684 true Scaffold1085: 9398-14081 Capsella grandiflora
Cagra.1085s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 9398-10397 Capsella grandiflora
Cagra.1085s0003 1.0kb downstream 1.0kb downstream 4684 true Scaffold1085: 10398-15081 Capsella grandiflora
Cagra.1085s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 14082-15081 Capsella grandiflora
Cagra.1085s0003 2.0kb upstream 2.0kb upstream 5684 true Scaffold1085: 8398-14081 Capsella grandiflora
Cagra.1085s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 8398-10397 Capsella grandiflora
Cagra.1085s0003 2.0kb downstream 2.0kb downstream 5684 true Scaffold1085: 10398-16081 Capsella grandiflora
Cagra.1085s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 14082-16081 Capsella grandiflora
Cagra.1085s0003 5.0kb upstream 5.0kb upstream 8684 true Scaffold1085: 5398-14081 Capsella grandiflora
Cagra.1085s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 5398-10397 Capsella grandiflora
Cagra.1085s0003 5.0kb downstream 5.0kb downstream 8684 true Scaffold1085: 10398-19081 Capsella grandiflora
Cagra.1085s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 14082-19081 Capsella grandiflora
Cagra.1085s0003 10.0kb upstream 10.0kb upstream 13684 true Scaffold1085: 398-14081 Capsella grandiflora
Cagra.1085s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 398-10397 Capsella grandiflora
Cagra.1085s0003 10.0kb downstream 10.0kb downstream 13684 true Scaffold1085: 10398-24081 Capsella grandiflora
Cagra.1085s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 14082-24081 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378971 5261 Brassicaceae View MSA
123837067 5264 Brassicales-Malvales View MSA
124347005 5266 SBM View MSA
124253802 5268 Malvidae View MSA
124074265 5270 Rosid View MSA
123741935 5271 Pentapetalae View MSA
122794442 5272 Eudicot View MSA
122048510 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain