Gene : Cagra.1085s0022 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  22
Name:  ? Cagra.1085s0022 Secondary Identifier:  ? PAC:28900586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0022 0.5kb upstream 0.5kb upstream 6905 true Scaffold1085: 88291-95195 Capsella grandiflora
Cagra.1085s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 94696-95195 Capsella grandiflora
Cagra.1085s0022 0.5kb downstream 0.5kb downstream 6905 true Scaffold1085: 87791-94695 Capsella grandiflora
Cagra.1085s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 87791-88290 Capsella grandiflora
Cagra.1085s0022 1.0kb upstream 1.0kb upstream 7405 true Scaffold1085: 88291-95695 Capsella grandiflora
Cagra.1085s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 94696-95695 Capsella grandiflora
Cagra.1085s0022 1.0kb downstream 1.0kb downstream 7405 true Scaffold1085: 87291-94695 Capsella grandiflora
Cagra.1085s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 87291-88290 Capsella grandiflora
Cagra.1085s0022 2.0kb upstream 2.0kb upstream 8405 true Scaffold1085: 88291-96695 Capsella grandiflora
Cagra.1085s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 94696-96695 Capsella grandiflora
Cagra.1085s0022 2.0kb downstream 2.0kb downstream 8405 true Scaffold1085: 86291-94695 Capsella grandiflora
Cagra.1085s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 86291-88290 Capsella grandiflora
Cagra.1085s0022 5.0kb upstream 5.0kb upstream 11405 true Scaffold1085: 88291-99695 Capsella grandiflora
Cagra.1085s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 94696-99695 Capsella grandiflora
Cagra.1085s0022 5.0kb downstream 5.0kb downstream 11405 true Scaffold1085: 83291-94695 Capsella grandiflora
Cagra.1085s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 83291-88290 Capsella grandiflora
Cagra.1085s0022 10.0kb upstream 10.0kb upstream 16405 true Scaffold1085: 88291-104695 Capsella grandiflora
Cagra.1085s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 94696-104695 Capsella grandiflora
Cagra.1085s0022 10.0kb downstream 10.0kb downstream 16405 true Scaffold1085: 78291-94695 Capsella grandiflora
Cagra.1085s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 78291-88290 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372212 5261 Brassicaceae View MSA
123830343 5264 Brassicales-Malvales View MSA
124339846 5266 SBM View MSA
124241686 5268 Malvidae View MSA
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain