Gene : Cagra.1085s0039 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22904:SF379 - RING ZINC FINGER-CONTAINING PROTEIN Genomic Order:  39
Name:  ? Cagra.1085s0039 Secondary Identifier:  ? PAC:28900604
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0039 0.5kb upstream 0.5kb upstream 3500 true Scaffold1085: 144757-148256 Capsella grandiflora
Cagra.1085s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 147757-148256 Capsella grandiflora
Cagra.1085s0039 0.5kb downstream 0.5kb downstream 3500 true Scaffold1085: 144257-147756 Capsella grandiflora
Cagra.1085s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 144257-144756 Capsella grandiflora
Cagra.1085s0039 1.0kb upstream 1.0kb upstream 4000 true Scaffold1085: 144757-148756 Capsella grandiflora
Cagra.1085s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 147757-148756 Capsella grandiflora
Cagra.1085s0039 1.0kb downstream 1.0kb downstream 4000 true Scaffold1085: 143757-147756 Capsella grandiflora
Cagra.1085s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 143757-144756 Capsella grandiflora
Cagra.1085s0039 2.0kb upstream 2.0kb upstream 5000 true Scaffold1085: 144757-149756 Capsella grandiflora
Cagra.1085s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 147757-149756 Capsella grandiflora
Cagra.1085s0039 2.0kb downstream 2.0kb downstream 5000 true Scaffold1085: 142757-147756 Capsella grandiflora
Cagra.1085s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 142757-144756 Capsella grandiflora
Cagra.1085s0039 5.0kb upstream 5.0kb upstream 8000 true Scaffold1085: 144757-152756 Capsella grandiflora
Cagra.1085s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 147757-152756 Capsella grandiflora
Cagra.1085s0039 5.0kb downstream 5.0kb downstream 8000 true Scaffold1085: 139757-147756 Capsella grandiflora
Cagra.1085s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 139757-144756 Capsella grandiflora
Cagra.1085s0039 10.0kb upstream 10.0kb upstream 13000 true Scaffold1085: 144757-157756 Capsella grandiflora
Cagra.1085s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 147757-157756 Capsella grandiflora
Cagra.1085s0039 10.0kb downstream 10.0kb downstream 13000 true Scaffold1085: 134757-147756 Capsella grandiflora
Cagra.1085s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 134757-144756 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041067 5273 Angiosperm View MSA
122365484 5261 Brassicaceae View MSA
123832240 5264 Brassicales-Malvales View MSA
124338232 5266 SBM View MSA
124240384 5268 Malvidae View MSA
124050138 5270 Rosid View MSA
123736944 5271 Pentapetalae View MSA
122792971 5272 Eudicot View MSA
121347266 5274 Embryophyte View MSA
123380522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain