Gene : Cagra.1085s0048 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10788:SF19 - TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  48
Name:  ? Cagra.1085s0048 Secondary Identifier:  ? PAC:28900590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0048 0.5kb upstream 0.5kb upstream 2717 true Scaffold1085: 187975-190691 Capsella grandiflora
Cagra.1085s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 190192-190691 Capsella grandiflora
Cagra.1085s0048 0.5kb downstream 0.5kb downstream 2717 true Scaffold1085: 187475-190191 Capsella grandiflora
Cagra.1085s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 187475-187974 Capsella grandiflora
Cagra.1085s0048 1.0kb upstream 1.0kb upstream 3217 true Scaffold1085: 187975-191191 Capsella grandiflora
Cagra.1085s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 190192-191191 Capsella grandiflora
Cagra.1085s0048 1.0kb downstream 1.0kb downstream 3217 true Scaffold1085: 186975-190191 Capsella grandiflora
Cagra.1085s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 186975-187974 Capsella grandiflora
Cagra.1085s0048 2.0kb upstream 2.0kb upstream 4217 true Scaffold1085: 187975-192191 Capsella grandiflora
Cagra.1085s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 190192-192191 Capsella grandiflora
Cagra.1085s0048 2.0kb downstream 2.0kb downstream 4217 true Scaffold1085: 185975-190191 Capsella grandiflora
Cagra.1085s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 185975-187974 Capsella grandiflora
Cagra.1085s0048 5.0kb upstream 5.0kb upstream 7217 true Scaffold1085: 187975-195191 Capsella grandiflora
Cagra.1085s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 190192-195191 Capsella grandiflora
Cagra.1085s0048 5.0kb downstream 5.0kb downstream 7217 true Scaffold1085: 182975-190191 Capsella grandiflora
Cagra.1085s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 182975-187974 Capsella grandiflora
Cagra.1085s0048 10.0kb upstream 10.0kb upstream 12217 true Scaffold1085: 187975-200191 Capsella grandiflora
Cagra.1085s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 190192-200191 Capsella grandiflora
Cagra.1085s0048 10.0kb downstream 10.0kb downstream 12217 true Scaffold1085: 177975-190191 Capsella grandiflora
Cagra.1085s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 177975-187974 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362885 5261 Brassicaceae View MSA
123838730 5264 Brassicales-Malvales View MSA
124345863 5266 SBM View MSA
124249781 5268 Malvidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain