Gene : Cagra.1085s0056 C. grandiflora v1.1
Genomic Order:  56 Name:  ? Cagra.1085s0056
Secondary Identifier:  ? PAC:28900607
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0056 0.5kb upstream 0.5kb upstream 4138 true Scaffold1085: 216947-221084 Capsella grandiflora
Cagra.1085s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 220585-221084 Capsella grandiflora
Cagra.1085s0056 0.5kb downstream 0.5kb downstream 4138 true Scaffold1085: 216447-220584 Capsella grandiflora
Cagra.1085s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 216447-216946 Capsella grandiflora
Cagra.1085s0056 1.0kb upstream 1.0kb upstream 4638 true Scaffold1085: 216947-221584 Capsella grandiflora
Cagra.1085s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 220585-221584 Capsella grandiflora
Cagra.1085s0056 1.0kb downstream 1.0kb downstream 4638 true Scaffold1085: 215947-220584 Capsella grandiflora
Cagra.1085s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 215947-216946 Capsella grandiflora
Cagra.1085s0056 2.0kb upstream 2.0kb upstream 5638 true Scaffold1085: 216947-222584 Capsella grandiflora
Cagra.1085s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 220585-222584 Capsella grandiflora
Cagra.1085s0056 2.0kb downstream 2.0kb downstream 5638 true Scaffold1085: 214947-220584 Capsella grandiflora
Cagra.1085s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 214947-216946 Capsella grandiflora
Cagra.1085s0056 5.0kb upstream 5.0kb upstream 8638 true Scaffold1085: 216947-225584 Capsella grandiflora
Cagra.1085s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 220585-225584 Capsella grandiflora
Cagra.1085s0056 5.0kb downstream 5.0kb downstream 8638 true Scaffold1085: 211947-220584 Capsella grandiflora
Cagra.1085s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 211947-216946 Capsella grandiflora
Cagra.1085s0056 10.0kb upstream 10.0kb upstream 13638 true Scaffold1085: 216947-230584 Capsella grandiflora
Cagra.1085s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 220585-230584 Capsella grandiflora
Cagra.1085s0056 10.0kb downstream 10.0kb downstream 13638 true Scaffold1085: 206947-220584 Capsella grandiflora
Cagra.1085s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 206947-216946 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374407 5261 Brassicaceae View MSA
123829906 5264 Brassicales-Malvales View MSA
124338718 5266 SBM View MSA
124236912 5268 Malvidae View MSA
124069078 5270 Rosid View MSA
123753152 5271 Pentapetalae View MSA
122786316 5272 Eudicot View MSA
122047224 5273 Angiosperm View MSA
121350831 5274 Embryophyte View MSA
123381898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain