Gene : Cagra.1062s0035 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23241:SF65 - LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN-RELATED Genomic Order:  35
Name:  ? Cagra.1062s0035 Secondary Identifier:  ? PAC:28908865
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1062s0035 0.5kb upstream 0.5kb upstream 1529 true Scaffold1062: 118020-119548 Capsella grandiflora
Cagra.1062s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold1062: 119049-119548 Capsella grandiflora
Cagra.1062s0035 0.5kb downstream 0.5kb downstream 1529 true Scaffold1062: 117520-119048 Capsella grandiflora
Cagra.1062s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold1062: 117520-118019 Capsella grandiflora
Cagra.1062s0035 1.0kb upstream 1.0kb upstream 2029 true Scaffold1062: 118020-120048 Capsella grandiflora
Cagra.1062s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold1062: 119049-120048 Capsella grandiflora
Cagra.1062s0035 1.0kb downstream 1.0kb downstream 2029 true Scaffold1062: 117020-119048 Capsella grandiflora
Cagra.1062s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold1062: 117020-118019 Capsella grandiflora
Cagra.1062s0035 2.0kb upstream 2.0kb upstream 3029 true Scaffold1062: 118020-121048 Capsella grandiflora
Cagra.1062s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold1062: 119049-121048 Capsella grandiflora
Cagra.1062s0035 2.0kb downstream 2.0kb downstream 3029 true Scaffold1062: 116020-119048 Capsella grandiflora
Cagra.1062s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold1062: 116020-118019 Capsella grandiflora
Cagra.1062s0035 5.0kb upstream 5.0kb upstream 6029 true Scaffold1062: 118020-124048 Capsella grandiflora
Cagra.1062s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold1062: 119049-124048 Capsella grandiflora
Cagra.1062s0035 5.0kb downstream 5.0kb downstream 6029 true Scaffold1062: 113020-119048 Capsella grandiflora
Cagra.1062s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold1062: 113020-118019 Capsella grandiflora
Cagra.1062s0035 10.0kb upstream 10.0kb upstream 11029 true Scaffold1062: 118020-129048 Capsella grandiflora
Cagra.1062s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold1062: 119049-129048 Capsella grandiflora
Cagra.1062s0035 10.0kb downstream 10.0kb downstream 11029 true Scaffold1062: 108020-119048 Capsella grandiflora
Cagra.1062s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold1062: 108020-118019 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373750 5261 Brassicaceae View MSA
123841274 5264 Brassicales-Malvales View MSA
124341278 5266 SBM View MSA
124250059 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain