Gene : Cagra.1036s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11831//PTHR11831:SF13 - 30S 40S RIBOSOMAL PROTEIN Genomic Order:  36
Name:  ? Cagra.1036s0036 Secondary Identifier:  ? PAC:28903741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1036s0036 0.5kb upstream 0.5kb upstream 1962 true Scaffold1036: 118072-120033 Capsella grandiflora
Cagra.1036s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1036: 118072-118571 Capsella grandiflora
Cagra.1036s0036 0.5kb downstream 0.5kb downstream 1962 true Scaffold1036: 118572-120533 Capsella grandiflora
Cagra.1036s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1036: 120034-120533 Capsella grandiflora
Cagra.1036s0036 1.0kb upstream 1.0kb upstream 2462 true Scaffold1036: 117572-120033 Capsella grandiflora
Cagra.1036s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1036: 117572-118571 Capsella grandiflora
Cagra.1036s0036 1.0kb downstream 1.0kb downstream 2462 true Scaffold1036: 118572-121033 Capsella grandiflora
Cagra.1036s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1036: 120034-121033 Capsella grandiflora
Cagra.1036s0036 2.0kb upstream 2.0kb upstream 3462 true Scaffold1036: 116572-120033 Capsella grandiflora
Cagra.1036s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1036: 116572-118571 Capsella grandiflora
Cagra.1036s0036 2.0kb downstream 2.0kb downstream 3462 true Scaffold1036: 118572-122033 Capsella grandiflora
Cagra.1036s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1036: 120034-122033 Capsella grandiflora
Cagra.1036s0036 5.0kb upstream 5.0kb upstream 6462 true Scaffold1036: 113572-120033 Capsella grandiflora
Cagra.1036s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold1036: 113572-118571 Capsella grandiflora
Cagra.1036s0036 5.0kb downstream 5.0kb downstream 6462 true Scaffold1036: 118572-125033 Capsella grandiflora
Cagra.1036s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1036: 120034-125033 Capsella grandiflora
Cagra.1036s0036 10.0kb upstream 10.0kb upstream 11462 true Scaffold1036: 108572-120033 Capsella grandiflora
Cagra.1036s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold1036: 108572-118571 Capsella grandiflora
Cagra.1036s0036 10.0kb downstream 10.0kb downstream 11462 true Scaffold1036: 118572-130033 Capsella grandiflora
Cagra.1036s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1036: 120034-130033 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361577 5261 Brassicaceae View MSA
123798203 5264 Brassicales-Malvales View MSA
124295874 5266 SBM View MSA
124253439 5268 Malvidae View MSA
124071399 5270 Rosid View MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain