Gene : Cagra.1043s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  26
Name:  ? Cagra.1043s0026 Secondary Identifier:  ? PAC:28897692
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-6837 Capsella grandiflora pathologic  
Cgrandiflora PWY-735 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0026 0.5kb upstream 0.5kb upstream 3818 true Scaffold1043: 89475-93292 Capsella grandiflora
Cagra.1043s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1043: 89475-89974 Capsella grandiflora
Cagra.1043s0026 0.5kb downstream 0.5kb downstream 3818 true Scaffold1043: 89975-93792 Capsella grandiflora
Cagra.1043s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 93293-93792 Capsella grandiflora
Cagra.1043s0026 1.0kb upstream 1.0kb upstream 4318 true Scaffold1043: 88975-93292 Capsella grandiflora
Cagra.1043s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1043: 88975-89974 Capsella grandiflora
Cagra.1043s0026 1.0kb downstream 1.0kb downstream 4318 true Scaffold1043: 89975-94292 Capsella grandiflora
Cagra.1043s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 93293-94292 Capsella grandiflora
Cagra.1043s0026 2.0kb upstream 2.0kb upstream 5318 true Scaffold1043: 87975-93292 Capsella grandiflora
Cagra.1043s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1043: 87975-89974 Capsella grandiflora
Cagra.1043s0026 2.0kb downstream 2.0kb downstream 5318 true Scaffold1043: 89975-95292 Capsella grandiflora
Cagra.1043s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 93293-95292 Capsella grandiflora
Cagra.1043s0026 5.0kb upstream 5.0kb upstream 8318 true Scaffold1043: 84975-93292 Capsella grandiflora
Cagra.1043s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1043: 84975-89974 Capsella grandiflora
Cagra.1043s0026 5.0kb downstream 5.0kb downstream 8318 true Scaffold1043: 89975-98292 Capsella grandiflora
Cagra.1043s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 93293-98292 Capsella grandiflora
Cagra.1043s0026 10.0kb upstream 10.0kb upstream 13318 true Scaffold1043: 79975-93292 Capsella grandiflora
Cagra.1043s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1043: 79975-89974 Capsella grandiflora
Cagra.1043s0026 10.0kb downstream 10.0kb downstream 13318 true Scaffold1043: 89975-103292 Capsella grandiflora
Cagra.1043s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 93293-103292 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373643 5261 Brassicaceae View MSA
123833749 5264 Brassicales-Malvales View MSA
124350232 5266 SBM View MSA
124245049 5268 Malvidae View MSA
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain