Gene : Cagra.1033s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11246//PTHR11246:SF14 - PRE-MRNA SPLICING FACTOR Genomic Order:  4
Name:  ? Cagra.1033s0004 Secondary Identifier:  ? PAC:28899848
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1033s0004 0.5kb upstream 0.5kb upstream 3619 true Scaffold1033: 8395-12013 Capsella grandiflora
Cagra.1033s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1033: 8395-8894 Capsella grandiflora
Cagra.1033s0004 0.5kb downstream 0.5kb downstream 3619 true Scaffold1033: 8895-12513 Capsella grandiflora
Cagra.1033s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1033: 12014-12513 Capsella grandiflora
Cagra.1033s0004 1.0kb upstream 1.0kb upstream 4119 true Scaffold1033: 7895-12013 Capsella grandiflora
Cagra.1033s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1033: 7895-8894 Capsella grandiflora
Cagra.1033s0004 1.0kb downstream 1.0kb downstream 4119 true Scaffold1033: 8895-13013 Capsella grandiflora
Cagra.1033s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1033: 12014-13013 Capsella grandiflora
Cagra.1033s0004 2.0kb upstream 2.0kb upstream 5119 true Scaffold1033: 6895-12013 Capsella grandiflora
Cagra.1033s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1033: 6895-8894 Capsella grandiflora
Cagra.1033s0004 2.0kb downstream 2.0kb downstream 5119 true Scaffold1033: 8895-14013 Capsella grandiflora
Cagra.1033s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1033: 12014-14013 Capsella grandiflora
Cagra.1033s0004 5.0kb upstream 5.0kb upstream 8119 true Scaffold1033: 3895-12013 Capsella grandiflora
Cagra.1033s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1033: 3895-8894 Capsella grandiflora
Cagra.1033s0004 5.0kb downstream 5.0kb downstream 8119 true Scaffold1033: 8895-17013 Capsella grandiflora
Cagra.1033s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1033: 12014-17013 Capsella grandiflora
Cagra.1033s0004 10.0kb upstream 10.0kb upstream 12013 true Scaffold1033: 1-12013 Capsella grandiflora
Cagra.1033s0004 10.0kb upstream 10.0kb upstream 8894 false Scaffold1033: 1-8894 Capsella grandiflora
Cagra.1033s0004 10.0kb downstream 10.0kb downstream 13119 true Scaffold1033: 8895-22013 Capsella grandiflora
Cagra.1033s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1033: 12014-22013 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366655 5261 Brassicaceae View MSA
123834223 5264 Brassicales-Malvales View MSA
124345838 5266 SBM View MSA
124239978 5268 Malvidae View MSA
124066520 5270 Rosid View MSA
123747782 5271 Pentapetalae View MSA
122796524 5272 Eudicot View MSA
122043261 5273 Angiosperm View MSA
121344122 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain