Gene : Cagra.1336s0023 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Genomic Order:  23
Name:  ? Cagra.1336s0023 Secondary Identifier:  ? PAC:28895996
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1336s0023 0.5kb upstream 0.5kb upstream 2169 true Scaffold1336: 74402-76570 Capsella grandiflora
Cagra.1336s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold1336: 76071-76570 Capsella grandiflora
Cagra.1336s0023 0.5kb downstream 0.5kb downstream 2169 true Scaffold1336: 73902-76070 Capsella grandiflora
Cagra.1336s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold1336: 73902-74401 Capsella grandiflora
Cagra.1336s0023 1.0kb upstream 1.0kb upstream 2669 true Scaffold1336: 74402-77070 Capsella grandiflora
Cagra.1336s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold1336: 76071-77070 Capsella grandiflora
Cagra.1336s0023 1.0kb downstream 1.0kb downstream 2669 true Scaffold1336: 73402-76070 Capsella grandiflora
Cagra.1336s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold1336: 73402-74401 Capsella grandiflora
Cagra.1336s0023 2.0kb upstream 2.0kb upstream 3669 true Scaffold1336: 74402-78070 Capsella grandiflora
Cagra.1336s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold1336: 76071-78070 Capsella grandiflora
Cagra.1336s0023 2.0kb downstream 2.0kb downstream 3669 true Scaffold1336: 72402-76070 Capsella grandiflora
Cagra.1336s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold1336: 72402-74401 Capsella grandiflora
Cagra.1336s0023 5.0kb upstream 5.0kb upstream 6669 true Scaffold1336: 74402-81070 Capsella grandiflora
Cagra.1336s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold1336: 76071-81070 Capsella grandiflora
Cagra.1336s0023 5.0kb downstream 5.0kb downstream 6669 true Scaffold1336: 69402-76070 Capsella grandiflora
Cagra.1336s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold1336: 69402-74401 Capsella grandiflora
Cagra.1336s0023 10.0kb upstream 10.0kb upstream 11669 true Scaffold1336: 74402-86070 Capsella grandiflora
Cagra.1336s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold1336: 76071-86070 Capsella grandiflora
Cagra.1336s0023 10.0kb downstream 10.0kb downstream 11669 true Scaffold1336: 64402-76070 Capsella grandiflora
Cagra.1336s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold1336: 64402-74401 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370997 5261 Brassicaceae View MSA
123828634 5264 Brassicales-Malvales View MSA
124350777 5266 SBM View MSA
124243399 5268 Malvidae View MSA
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain