Gene : Cagra.1360s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23415 - CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 Genomic Order:  3
Name:  ? Cagra.1360s0003 Secondary Identifier:  ? PAC:28918493
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1360s0003 0.5kb upstream 0.5kb upstream 1913 true Scaffold1360: 13079-14991 Capsella grandiflora
Cagra.1360s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1360: 14492-14991 Capsella grandiflora
Cagra.1360s0003 0.5kb downstream 0.5kb downstream 1913 true Scaffold1360: 12579-14491 Capsella grandiflora
Cagra.1360s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1360: 12579-13078 Capsella grandiflora
Cagra.1360s0003 1.0kb upstream 1.0kb upstream 2413 true Scaffold1360: 13079-15491 Capsella grandiflora
Cagra.1360s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1360: 14492-15491 Capsella grandiflora
Cagra.1360s0003 1.0kb downstream 1.0kb downstream 2413 true Scaffold1360: 12079-14491 Capsella grandiflora
Cagra.1360s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1360: 12079-13078 Capsella grandiflora
Cagra.1360s0003 2.0kb upstream 2.0kb upstream 3413 true Scaffold1360: 13079-16491 Capsella grandiflora
Cagra.1360s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1360: 14492-16491 Capsella grandiflora
Cagra.1360s0003 2.0kb downstream 2.0kb downstream 3413 true Scaffold1360: 11079-14491 Capsella grandiflora
Cagra.1360s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1360: 11079-13078 Capsella grandiflora
Cagra.1360s0003 5.0kb upstream 5.0kb upstream 6413 true Scaffold1360: 13079-19491 Capsella grandiflora
Cagra.1360s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1360: 14492-19491 Capsella grandiflora
Cagra.1360s0003 5.0kb downstream 5.0kb downstream 6413 true Scaffold1360: 8079-14491 Capsella grandiflora
Cagra.1360s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1360: 8079-13078 Capsella grandiflora
Cagra.1360s0003 10.0kb upstream 10.0kb upstream 11413 true Scaffold1360: 13079-24491 Capsella grandiflora
Cagra.1360s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1360: 14492-24491 Capsella grandiflora
Cagra.1360s0003 10.0kb downstream 10.0kb downstream 11413 true Scaffold1360: 3079-14491 Capsella grandiflora
Cagra.1360s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1360: 3079-13078 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502810 5273 Angiosperm View MSA
122343708 5261 Brassicaceae View MSA
123783823 5264 Brassicales-Malvales View MSA
124282036 5266 SBM View MSA
124136698 5268 Malvidae View MSA
123864515 5270 Rosid View MSA
123449818 5271 Pentapetalae View MSA
122485347 5272 Eudicot View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain