Gene : Cagra.1361s0006 C. grandiflora v1.1
Defline:  (1 of 27) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  6
Name:  ? Cagra.1361s0006 Secondary Identifier:  ? PAC:28915595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0006 0.5kb upstream 0.5kb upstream 2212 true Scaffold1361: 24002-26213 Capsella grandiflora
Cagra.1361s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 24002-24501 Capsella grandiflora
Cagra.1361s0006 0.5kb downstream 0.5kb downstream 2212 true Scaffold1361: 24502-26713 Capsella grandiflora
Cagra.1361s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 26214-26713 Capsella grandiflora
Cagra.1361s0006 1.0kb upstream 1.0kb upstream 2712 true Scaffold1361: 23502-26213 Capsella grandiflora
Cagra.1361s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 23502-24501 Capsella grandiflora
Cagra.1361s0006 1.0kb downstream 1.0kb downstream 2712 true Scaffold1361: 24502-27213 Capsella grandiflora
Cagra.1361s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 26214-27213 Capsella grandiflora
Cagra.1361s0006 2.0kb upstream 2.0kb upstream 3712 true Scaffold1361: 22502-26213 Capsella grandiflora
Cagra.1361s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 22502-24501 Capsella grandiflora
Cagra.1361s0006 2.0kb downstream 2.0kb downstream 3712 true Scaffold1361: 24502-28213 Capsella grandiflora
Cagra.1361s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 26214-28213 Capsella grandiflora
Cagra.1361s0006 5.0kb upstream 5.0kb upstream 6712 true Scaffold1361: 19502-26213 Capsella grandiflora
Cagra.1361s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 19502-24501 Capsella grandiflora
Cagra.1361s0006 5.0kb downstream 5.0kb downstream 6712 true Scaffold1361: 24502-31213 Capsella grandiflora
Cagra.1361s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 26214-31213 Capsella grandiflora
Cagra.1361s0006 10.0kb upstream 10.0kb upstream 11712 true Scaffold1361: 14502-26213 Capsella grandiflora
Cagra.1361s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 14502-24501 Capsella grandiflora
Cagra.1361s0006 10.0kb downstream 10.0kb downstream 11712 true Scaffold1361: 24502-36213 Capsella grandiflora
Cagra.1361s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 26214-36213 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377236 5261 Brassicaceae View MSA
123827468 5264 Brassicales-Malvales View MSA
124344907 5266 SBM View MSA
124238159 5268 Malvidae View MSA
124060645 5270 Rosid View MSA
123746577 5271 Pentapetalae View MSA
122790367 5272 Eudicot View MSA
122043422 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain