Gene : Cagra.1310s0007 C. grandiflora v1.1
Defline:  (1 of 7) PTHR27006:SF44 - LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE Genomic Order:  7
Name:  ? Cagra.1310s0007 Secondary Identifier:  ? PAC:28904767
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1310s0007 0.5kb upstream 0.5kb upstream 6602 true Scaffold1310: 31930-38531 Capsella grandiflora
Cagra.1310s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1310: 38032-38531 Capsella grandiflora
Cagra.1310s0007 0.5kb downstream 0.5kb downstream 6602 true Scaffold1310: 31430-38031 Capsella grandiflora
Cagra.1310s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1310: 31430-31929 Capsella grandiflora
Cagra.1310s0007 1.0kb upstream 1.0kb upstream 7102 true Scaffold1310: 31930-39031 Capsella grandiflora
Cagra.1310s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1310: 38032-39031 Capsella grandiflora
Cagra.1310s0007 1.0kb downstream 1.0kb downstream 7102 true Scaffold1310: 30930-38031 Capsella grandiflora
Cagra.1310s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1310: 30930-31929 Capsella grandiflora
Cagra.1310s0007 2.0kb upstream 2.0kb upstream 8102 true Scaffold1310: 31930-40031 Capsella grandiflora
Cagra.1310s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1310: 38032-40031 Capsella grandiflora
Cagra.1310s0007 2.0kb downstream 2.0kb downstream 8102 true Scaffold1310: 29930-38031 Capsella grandiflora
Cagra.1310s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1310: 29930-31929 Capsella grandiflora
Cagra.1310s0007 5.0kb upstream 5.0kb upstream 11102 true Scaffold1310: 31930-43031 Capsella grandiflora
Cagra.1310s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1310: 38032-43031 Capsella grandiflora
Cagra.1310s0007 5.0kb downstream 5.0kb downstream 11102 true Scaffold1310: 26930-38031 Capsella grandiflora
Cagra.1310s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1310: 26930-31929 Capsella grandiflora
Cagra.1310s0007 10.0kb upstream 10.0kb upstream 16102 true Scaffold1310: 31930-48031 Capsella grandiflora
Cagra.1310s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1310: 38032-48031 Capsella grandiflora
Cagra.1310s0007 10.0kb downstream 10.0kb downstream 16102 true Scaffold1310: 21930-38031 Capsella grandiflora
Cagra.1310s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1310: 21930-31929 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362119 5261 Brassicaceae View MSA
123838045 5264 Brassicales-Malvales View MSA
124344424 5266 SBM View MSA
124245862 5268 Malvidae View MSA
124072019 5270 Rosid View MSA
123750950 5271 Pentapetalae View MSA
122793307 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain