Gene : Cagra.1268s0033 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11062:SF84 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  33
Name:  ? Cagra.1268s0033 Secondary Identifier:  ? PAC:28893602
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5980 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0033 0.5kb upstream 0.5kb upstream 3240 true Scaffold1268: 107365-110604 Capsella grandiflora
Cagra.1268s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 110105-110604 Capsella grandiflora
Cagra.1268s0033 0.5kb downstream 0.5kb downstream 3240 true Scaffold1268: 106865-110104 Capsella grandiflora
Cagra.1268s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 106865-107364 Capsella grandiflora
Cagra.1268s0033 1.0kb upstream 1.0kb upstream 3740 true Scaffold1268: 107365-111104 Capsella grandiflora
Cagra.1268s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 110105-111104 Capsella grandiflora
Cagra.1268s0033 1.0kb downstream 1.0kb downstream 3740 true Scaffold1268: 106365-110104 Capsella grandiflora
Cagra.1268s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 106365-107364 Capsella grandiflora
Cagra.1268s0033 2.0kb upstream 2.0kb upstream 4740 true Scaffold1268: 107365-112104 Capsella grandiflora
Cagra.1268s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 110105-112104 Capsella grandiflora
Cagra.1268s0033 2.0kb downstream 2.0kb downstream 4740 true Scaffold1268: 105365-110104 Capsella grandiflora
Cagra.1268s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 105365-107364 Capsella grandiflora
Cagra.1268s0033 5.0kb upstream 5.0kb upstream 7740 true Scaffold1268: 107365-115104 Capsella grandiflora
Cagra.1268s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 110105-115104 Capsella grandiflora
Cagra.1268s0033 5.0kb downstream 5.0kb downstream 7740 true Scaffold1268: 102365-110104 Capsella grandiflora
Cagra.1268s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 102365-107364 Capsella grandiflora
Cagra.1268s0033 10.0kb upstream 10.0kb upstream 12740 true Scaffold1268: 107365-120104 Capsella grandiflora
Cagra.1268s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 110105-120104 Capsella grandiflora
Cagra.1268s0033 10.0kb downstream 10.0kb downstream 12740 true Scaffold1268: 97365-110104 Capsella grandiflora
Cagra.1268s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 97365-107364 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372980 5261 Brassicaceae View MSA
123835027 5264 Brassicales-Malvales View MSA
124345705 5266 SBM View MSA
124243747 5268 Malvidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain