Gene : Cagra.1226s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24349:SF95 - CALCIUM-DEPENDENT PROTEIN KINASE 3 Genomic Order:  27
Name:  ? Cagra.1226s0027 Secondary Identifier:  ? PAC:28916551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0027 0.5kb upstream 0.5kb upstream 3303 true Scaffold1226: 109004-112306 Capsella grandiflora
Cagra.1226s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 111807-112306 Capsella grandiflora
Cagra.1226s0027 0.5kb downstream 0.5kb downstream 3303 true Scaffold1226: 108504-111806 Capsella grandiflora
Cagra.1226s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 108504-109003 Capsella grandiflora
Cagra.1226s0027 1.0kb upstream 1.0kb upstream 3803 true Scaffold1226: 109004-112806 Capsella grandiflora
Cagra.1226s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 111807-112806 Capsella grandiflora
Cagra.1226s0027 1.0kb downstream 1.0kb downstream 3803 true Scaffold1226: 108004-111806 Capsella grandiflora
Cagra.1226s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 108004-109003 Capsella grandiflora
Cagra.1226s0027 2.0kb upstream 2.0kb upstream 4803 true Scaffold1226: 109004-113806 Capsella grandiflora
Cagra.1226s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 111807-113806 Capsella grandiflora
Cagra.1226s0027 2.0kb downstream 2.0kb downstream 4803 true Scaffold1226: 107004-111806 Capsella grandiflora
Cagra.1226s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 107004-109003 Capsella grandiflora
Cagra.1226s0027 5.0kb upstream 5.0kb upstream 7803 true Scaffold1226: 109004-116806 Capsella grandiflora
Cagra.1226s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 111807-116806 Capsella grandiflora
Cagra.1226s0027 5.0kb downstream 5.0kb downstream 7803 true Scaffold1226: 104004-111806 Capsella grandiflora
Cagra.1226s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 104004-109003 Capsella grandiflora
Cagra.1226s0027 10.0kb upstream 10.0kb upstream 12803 true Scaffold1226: 109004-121806 Capsella grandiflora
Cagra.1226s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 111807-121806 Capsella grandiflora
Cagra.1226s0027 10.0kb downstream 10.0kb downstream 12803 true Scaffold1226: 99004-111806 Capsella grandiflora
Cagra.1226s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 99004-109003 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363556 5261 Brassicaceae View MSA
123833660 5264 Brassicales-Malvales View MSA
124343506 5266 SBM View MSA
124239172 5268 Malvidae View MSA
124061740 5270 Rosid View MSA
123741136 5271 Pentapetalae View MSA
122788703 5272 Eudicot View MSA
122043516 5273 Angiosperm View MSA
121349479 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain