Gene : Cagra.1226s0044 C. grandiflora v1.1
Defline:  (1 of 69) PF03106 - WRKY DNA -binding domain (WRKY) Genomic Order:  44
Name:  ? Cagra.1226s0044 Secondary Identifier:  ? PAC:28916585
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0044 0.5kb upstream 0.5kb upstream 2056 true Scaffold1226: 189393-191448 Capsella grandiflora
Cagra.1226s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 190949-191448 Capsella grandiflora
Cagra.1226s0044 0.5kb downstream 0.5kb downstream 2056 true Scaffold1226: 188893-190948 Capsella grandiflora
Cagra.1226s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 188893-189392 Capsella grandiflora
Cagra.1226s0044 1.0kb upstream 1.0kb upstream 2556 true Scaffold1226: 189393-191948 Capsella grandiflora
Cagra.1226s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 190949-191948 Capsella grandiflora
Cagra.1226s0044 1.0kb downstream 1.0kb downstream 2556 true Scaffold1226: 188393-190948 Capsella grandiflora
Cagra.1226s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 188393-189392 Capsella grandiflora
Cagra.1226s0044 2.0kb upstream 2.0kb upstream 3556 true Scaffold1226: 189393-192948 Capsella grandiflora
Cagra.1226s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 190949-192948 Capsella grandiflora
Cagra.1226s0044 2.0kb downstream 2.0kb downstream 3556 true Scaffold1226: 187393-190948 Capsella grandiflora
Cagra.1226s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 187393-189392 Capsella grandiflora
Cagra.1226s0044 5.0kb upstream 5.0kb upstream 6556 true Scaffold1226: 189393-195948 Capsella grandiflora
Cagra.1226s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 190949-195948 Capsella grandiflora
Cagra.1226s0044 5.0kb downstream 5.0kb downstream 6556 true Scaffold1226: 184393-190948 Capsella grandiflora
Cagra.1226s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 184393-189392 Capsella grandiflora
Cagra.1226s0044 10.0kb upstream 10.0kb upstream 11556 true Scaffold1226: 189393-200948 Capsella grandiflora
Cagra.1226s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 190949-200948 Capsella grandiflora
Cagra.1226s0044 10.0kb downstream 10.0kb downstream 11556 true Scaffold1226: 179393-190948 Capsella grandiflora
Cagra.1226s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 179393-189392 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374894 5261 Brassicaceae View MSA
123840808 5264 Brassicales-Malvales View MSA
124349002 5266 SBM View MSA
124251852 5268 Malvidae View MSA
124070088 5270 Rosid View MSA
123748507 5271 Pentapetalae View MSA
122792318 5272 Eudicot View MSA
122042509 5273 Angiosperm View MSA
121351570 5274 Embryophyte View MSA
123382232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain