Gene : Cagra.1226s0048 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13513 - E3 UBIQUITIN-PROTEIN LIGASE UBR7 Genomic Order:  48
Name:  ? Cagra.1226s0048 Secondary Identifier:  ? PAC:28916560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0048 0.5kb upstream 0.5kb upstream 2954 true Scaffold1226: 205349-208302 Capsella grandiflora
Cagra.1226s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 205349-205848 Capsella grandiflora
Cagra.1226s0048 0.5kb downstream 0.5kb downstream 2954 true Scaffold1226: 205849-208802 Capsella grandiflora
Cagra.1226s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 208303-208802 Capsella grandiflora
Cagra.1226s0048 1.0kb upstream 1.0kb upstream 3454 true Scaffold1226: 204849-208302 Capsella grandiflora
Cagra.1226s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 204849-205848 Capsella grandiflora
Cagra.1226s0048 1.0kb downstream 1.0kb downstream 3454 true Scaffold1226: 205849-209302 Capsella grandiflora
Cagra.1226s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 208303-209302 Capsella grandiflora
Cagra.1226s0048 2.0kb upstream 2.0kb upstream 4454 true Scaffold1226: 203849-208302 Capsella grandiflora
Cagra.1226s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 203849-205848 Capsella grandiflora
Cagra.1226s0048 2.0kb downstream 2.0kb downstream 4454 true Scaffold1226: 205849-210302 Capsella grandiflora
Cagra.1226s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 208303-210302 Capsella grandiflora
Cagra.1226s0048 5.0kb upstream 5.0kb upstream 7454 true Scaffold1226: 200849-208302 Capsella grandiflora
Cagra.1226s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 200849-205848 Capsella grandiflora
Cagra.1226s0048 5.0kb downstream 5.0kb downstream 7454 true Scaffold1226: 205849-213302 Capsella grandiflora
Cagra.1226s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 208303-213302 Capsella grandiflora
Cagra.1226s0048 10.0kb upstream 10.0kb upstream 12454 true Scaffold1226: 195849-208302 Capsella grandiflora
Cagra.1226s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 195849-205848 Capsella grandiflora
Cagra.1226s0048 10.0kb downstream 10.0kb downstream 12454 true Scaffold1226: 205849-218302 Capsella grandiflora
Cagra.1226s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 208303-218302 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370669 5261 Brassicaceae View MSA
123832085 5264 Brassicales-Malvales View MSA
124346316 5266 SBM View MSA
124239514 5268 Malvidae View MSA
124062977 5270 Rosid View MSA
123737200 5271 Pentapetalae View MSA
122790604 5272 Eudicot View MSA
122043185 5273 Angiosperm View MSA
121344097 5274 Embryophyte View MSA
123379975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain