Gene : Cagra.1226s0051 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22814:SF14 - ATFP6-LIKE PROTEIN-RELATED Genomic Order:  51
Name:  ? Cagra.1226s0051 Secondary Identifier:  ? PAC:28916494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0051 0.5kb upstream 0.5kb upstream 1337 true Scaffold1226: 214168-215504 Capsella grandiflora
Cagra.1226s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 214168-214667 Capsella grandiflora
Cagra.1226s0051 0.5kb downstream 0.5kb downstream 1337 true Scaffold1226: 214668-216004 Capsella grandiflora
Cagra.1226s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 215505-216004 Capsella grandiflora
Cagra.1226s0051 1.0kb upstream 1.0kb upstream 1837 true Scaffold1226: 213668-215504 Capsella grandiflora
Cagra.1226s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 213668-214667 Capsella grandiflora
Cagra.1226s0051 1.0kb downstream 1.0kb downstream 1837 true Scaffold1226: 214668-216504 Capsella grandiflora
Cagra.1226s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 215505-216504 Capsella grandiflora
Cagra.1226s0051 2.0kb upstream 2.0kb upstream 2837 true Scaffold1226: 212668-215504 Capsella grandiflora
Cagra.1226s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 212668-214667 Capsella grandiflora
Cagra.1226s0051 2.0kb downstream 2.0kb downstream 2837 true Scaffold1226: 214668-217504 Capsella grandiflora
Cagra.1226s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 215505-217504 Capsella grandiflora
Cagra.1226s0051 5.0kb upstream 5.0kb upstream 5837 true Scaffold1226: 209668-215504 Capsella grandiflora
Cagra.1226s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 209668-214667 Capsella grandiflora
Cagra.1226s0051 5.0kb downstream 5.0kb downstream 5837 true Scaffold1226: 214668-220504 Capsella grandiflora
Cagra.1226s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 215505-220504 Capsella grandiflora
Cagra.1226s0051 10.0kb upstream 10.0kb upstream 10837 true Scaffold1226: 204668-215504 Capsella grandiflora
Cagra.1226s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 204668-214667 Capsella grandiflora
Cagra.1226s0051 10.0kb downstream 10.0kb downstream 10837 true Scaffold1226: 214668-225504 Capsella grandiflora
Cagra.1226s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 215505-225504 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371997 5261 Brassicaceae View MSA
123800277 5264 Brassicales-Malvales View MSA
124297710 5266 SBM View MSA
124249975 5268 Malvidae View MSA
124070484 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain