Gene : Cagra.1209s0004 C. grandiflora v1.1
Defline:  (1 of 3) 2.7.7.52 - RNA uridylyltransferase / TUT Genomic Order:  4
Name:  ? Cagra.1209s0004 Secondary Identifier:  ? PAC:28898920
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1209s0004 0.5kb upstream 0.5kb upstream 5203 true Scaffold1209: 11072-16274 Capsella grandiflora
Cagra.1209s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1209: 11072-11571 Capsella grandiflora
Cagra.1209s0004 0.5kb downstream 0.5kb downstream 5203 true Scaffold1209: 11572-16774 Capsella grandiflora
Cagra.1209s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1209: 16275-16774 Capsella grandiflora
Cagra.1209s0004 1.0kb upstream 1.0kb upstream 5703 true Scaffold1209: 10572-16274 Capsella grandiflora
Cagra.1209s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1209: 10572-11571 Capsella grandiflora
Cagra.1209s0004 1.0kb downstream 1.0kb downstream 5703 true Scaffold1209: 11572-17274 Capsella grandiflora
Cagra.1209s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1209: 16275-17274 Capsella grandiflora
Cagra.1209s0004 2.0kb upstream 2.0kb upstream 6703 true Scaffold1209: 9572-16274 Capsella grandiflora
Cagra.1209s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1209: 9572-11571 Capsella grandiflora
Cagra.1209s0004 2.0kb downstream 2.0kb downstream 6703 true Scaffold1209: 11572-18274 Capsella grandiflora
Cagra.1209s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1209: 16275-18274 Capsella grandiflora
Cagra.1209s0004 5.0kb upstream 5.0kb upstream 9703 true Scaffold1209: 6572-16274 Capsella grandiflora
Cagra.1209s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1209: 6572-11571 Capsella grandiflora
Cagra.1209s0004 5.0kb downstream 5.0kb downstream 9703 true Scaffold1209: 11572-21274 Capsella grandiflora
Cagra.1209s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1209: 16275-21274 Capsella grandiflora
Cagra.1209s0004 10.0kb upstream 10.0kb upstream 14703 true Scaffold1209: 1572-16274 Capsella grandiflora
Cagra.1209s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1209: 1572-11571 Capsella grandiflora
Cagra.1209s0004 10.0kb downstream 10.0kb downstream 14703 true Scaffold1209: 11572-26274 Capsella grandiflora
Cagra.1209s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1209: 16275-26274 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343252 5261 Brassicaceae View MSA
123783505 5264 Brassicales-Malvales View MSA
124281734 5266 SBM View MSA
124136442 5268 Malvidae View MSA
124072244 5270 Rosid View MSA
123743484 5271 Pentapetalae View MSA
122791393 5272 Eudicot View MSA
122043150 5273 Angiosperm View MSA
121349323 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain