Gene : Cagra.1209s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24055:SF214 - MITOGEN-ACTIVATED PROTEIN KINASE 3 Genomic Order:  12
Name:  ? Cagra.1209s0012 Secondary Identifier:  ? PAC:28898916
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1209s0012 0.5kb upstream 0.5kb upstream 2572 true Scaffold1209: 46256-48827 Capsella grandiflora
Cagra.1209s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1209: 48328-48827 Capsella grandiflora
Cagra.1209s0012 0.5kb downstream 0.5kb downstream 2572 true Scaffold1209: 45756-48327 Capsella grandiflora
Cagra.1209s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1209: 45756-46255 Capsella grandiflora
Cagra.1209s0012 1.0kb upstream 1.0kb upstream 3072 true Scaffold1209: 46256-49327 Capsella grandiflora
Cagra.1209s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1209: 48328-49327 Capsella grandiflora
Cagra.1209s0012 1.0kb downstream 1.0kb downstream 3072 true Scaffold1209: 45256-48327 Capsella grandiflora
Cagra.1209s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1209: 45256-46255 Capsella grandiflora
Cagra.1209s0012 2.0kb upstream 2.0kb upstream 4072 true Scaffold1209: 46256-50327 Capsella grandiflora
Cagra.1209s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1209: 48328-50327 Capsella grandiflora
Cagra.1209s0012 2.0kb downstream 2.0kb downstream 4072 true Scaffold1209: 44256-48327 Capsella grandiflora
Cagra.1209s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1209: 44256-46255 Capsella grandiflora
Cagra.1209s0012 5.0kb upstream 5.0kb upstream 7072 true Scaffold1209: 46256-53327 Capsella grandiflora
Cagra.1209s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1209: 48328-53327 Capsella grandiflora
Cagra.1209s0012 5.0kb downstream 5.0kb downstream 7072 true Scaffold1209: 41256-48327 Capsella grandiflora
Cagra.1209s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1209: 41256-46255 Capsella grandiflora
Cagra.1209s0012 10.0kb upstream 10.0kb upstream 12072 true Scaffold1209: 46256-58327 Capsella grandiflora
Cagra.1209s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1209: 48328-58327 Capsella grandiflora
Cagra.1209s0012 10.0kb downstream 10.0kb downstream 12072 true Scaffold1209: 36256-48327 Capsella grandiflora
Cagra.1209s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1209: 36256-46255 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368528 5261 Brassicaceae View MSA
123833747 5264 Brassicales-Malvales View MSA
124340238 5266 SBM View MSA
124241277 5268 Malvidae View MSA
124066490 5270 Rosid View MSA
123739080 5271 Pentapetalae View MSA
122791748 5272 Eudicot View MSA
122050420 5273 Angiosperm View MSA
121352575 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain