Gene : Cagra.1220s0003 C. grandiflora v1.1
Defline:  (1 of 12) PTHR23430 - HISTONE H2A Genomic Order:  3
Name:  ? Cagra.1220s0003 Secondary Identifier:  ? PAC:28910718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1220s0003 0.5kb upstream 0.5kb upstream 1208 true Scaffold1220: 10148-11355 Capsella grandiflora
Cagra.1220s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1220: 10148-10647 Capsella grandiflora
Cagra.1220s0003 0.5kb downstream 0.5kb downstream 1208 true Scaffold1220: 10648-11855 Capsella grandiflora
Cagra.1220s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1220: 11356-11855 Capsella grandiflora
Cagra.1220s0003 1.0kb upstream 1.0kb upstream 1708 true Scaffold1220: 9648-11355 Capsella grandiflora
Cagra.1220s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1220: 9648-10647 Capsella grandiflora
Cagra.1220s0003 1.0kb downstream 1.0kb downstream 1708 true Scaffold1220: 10648-12355 Capsella grandiflora
Cagra.1220s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1220: 11356-12355 Capsella grandiflora
Cagra.1220s0003 2.0kb upstream 2.0kb upstream 2708 true Scaffold1220: 8648-11355 Capsella grandiflora
Cagra.1220s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1220: 8648-10647 Capsella grandiflora
Cagra.1220s0003 2.0kb downstream 2.0kb downstream 2708 true Scaffold1220: 10648-13355 Capsella grandiflora
Cagra.1220s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1220: 11356-13355 Capsella grandiflora
Cagra.1220s0003 5.0kb upstream 5.0kb upstream 5708 true Scaffold1220: 5648-11355 Capsella grandiflora
Cagra.1220s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1220: 5648-10647 Capsella grandiflora
Cagra.1220s0003 5.0kb downstream 5.0kb downstream 5708 true Scaffold1220: 10648-16355 Capsella grandiflora
Cagra.1220s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1220: 11356-16355 Capsella grandiflora
Cagra.1220s0003 10.0kb upstream 10.0kb upstream 10708 true Scaffold1220: 648-11355 Capsella grandiflora
Cagra.1220s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1220: 648-10647 Capsella grandiflora
Cagra.1220s0003 10.0kb downstream 10.0kb downstream 10708 true Scaffold1220: 10648-21355 Capsella grandiflora
Cagra.1220s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1220: 11356-21355 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380368 5261 Brassicaceae View MSA
123840561 5264 Brassicales-Malvales View MSA
124337241 5266 SBM View MSA
124240276 5268 Malvidae View MSA
124063341 5270 Rosid View MSA
123745696 5271 Pentapetalae View MSA
122790342 5272 Eudicot View MSA
122050010 5273 Angiosperm View MSA
121343825 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain