Gene : Cagra.1194s0058 C. grandiflora v1.1
Defline:  (1 of 3) PTHR35727:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 10-RELATED Genomic Order:  58
Name:  ? Cagra.1194s0058 Secondary Identifier:  ? PAC:28912820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0058 0.5kb upstream 0.5kb upstream 757 true Scaffold1194: 169027-169783 Capsella grandiflora
Cagra.1194s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 169284-169783 Capsella grandiflora
Cagra.1194s0058 0.5kb downstream 0.5kb downstream 757 true Scaffold1194: 168527-169283 Capsella grandiflora
Cagra.1194s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 168527-169026 Capsella grandiflora
Cagra.1194s0058 1.0kb upstream 1.0kb upstream 1257 true Scaffold1194: 169027-170283 Capsella grandiflora
Cagra.1194s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 169284-170283 Capsella grandiflora
Cagra.1194s0058 1.0kb downstream 1.0kb downstream 1257 true Scaffold1194: 168027-169283 Capsella grandiflora
Cagra.1194s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 168027-169026 Capsella grandiflora
Cagra.1194s0058 2.0kb upstream 2.0kb upstream 2257 true Scaffold1194: 169027-171283 Capsella grandiflora
Cagra.1194s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 169284-171283 Capsella grandiflora
Cagra.1194s0058 2.0kb downstream 2.0kb downstream 2257 true Scaffold1194: 167027-169283 Capsella grandiflora
Cagra.1194s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 167027-169026 Capsella grandiflora
Cagra.1194s0058 5.0kb upstream 5.0kb upstream 5257 true Scaffold1194: 169027-174283 Capsella grandiflora
Cagra.1194s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 169284-174283 Capsella grandiflora
Cagra.1194s0058 5.0kb downstream 5.0kb downstream 5257 true Scaffold1194: 164027-169283 Capsella grandiflora
Cagra.1194s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 164027-169026 Capsella grandiflora
Cagra.1194s0058 10.0kb upstream 10.0kb upstream 10257 true Scaffold1194: 169027-179283 Capsella grandiflora
Cagra.1194s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 169284-179283 Capsella grandiflora
Cagra.1194s0058 10.0kb downstream 10.0kb downstream 10257 true Scaffold1194: 159027-169283 Capsella grandiflora
Cagra.1194s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 159027-169026 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380209 5261 Brassicaceae View MSA
123837481 5264 Brassicales-Malvales View MSA
124350039 5266 SBM View MSA
124252061 5268 Malvidae View MSA
124069514 5270 Rosid View MSA
123743375 5271 Pentapetalae View MSA
122770636 5272 Eudicot View MSA
122049169 5273 Angiosperm View MSA
121348872 5274 Embryophyte View MSA
123381051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain