Gene : Cagra.1201s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13803//PTHR13803:SF10 - SEC24-RELATED PROTEIN Genomic Order:  4
Name:  ? Cagra.1201s0004 Secondary Identifier:  ? PAC:28910412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1201s0004 0.5kb upstream 0.5kb upstream 2949 true Scaffold1201: 15108-18056 Capsella grandiflora
Cagra.1201s0004 0.5kb upstream 0.5kb upstream 25 false Scaffold1201: 18032-18056 Capsella grandiflora
Cagra.1201s0004 0.5kb downstream 0.5kb downstream 3424 true Scaffold1201: 14608-18031 Capsella grandiflora
Cagra.1201s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1201: 14608-15107 Capsella grandiflora
Cagra.1201s0004 1.0kb upstream 1.0kb upstream 2949 true Scaffold1201: 15108-18056 Capsella grandiflora
Cagra.1201s0004 1.0kb upstream 1.0kb upstream 25 false Scaffold1201: 18032-18056 Capsella grandiflora
Cagra.1201s0004 1.0kb downstream 1.0kb downstream 3924 true Scaffold1201: 14108-18031 Capsella grandiflora
Cagra.1201s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1201: 14108-15107 Capsella grandiflora
Cagra.1201s0004 2.0kb upstream 2.0kb upstream 2949 true Scaffold1201: 15108-18056 Capsella grandiflora
Cagra.1201s0004 2.0kb upstream 2.0kb upstream 25 false Scaffold1201: 18032-18056 Capsella grandiflora
Cagra.1201s0004 2.0kb downstream 2.0kb downstream 4924 true Scaffold1201: 13108-18031 Capsella grandiflora
Cagra.1201s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1201: 13108-15107 Capsella grandiflora
Cagra.1201s0004 5.0kb upstream 5.0kb upstream 2949 true Scaffold1201: 15108-18056 Capsella grandiflora
Cagra.1201s0004 5.0kb upstream 5.0kb upstream 25 false Scaffold1201: 18032-18056 Capsella grandiflora
Cagra.1201s0004 5.0kb downstream 5.0kb downstream 7924 true Scaffold1201: 10108-18031 Capsella grandiflora
Cagra.1201s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1201: 10108-15107 Capsella grandiflora
Cagra.1201s0004 10.0kb upstream 10.0kb upstream 2949 true Scaffold1201: 15108-18056 Capsella grandiflora
Cagra.1201s0004 10.0kb upstream 10.0kb upstream 25 false Scaffold1201: 18032-18056 Capsella grandiflora
Cagra.1201s0004 10.0kb downstream 10.0kb downstream 12924 true Scaffold1201: 5108-18031 Capsella grandiflora
Cagra.1201s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1201: 5108-15107 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657097 5273 Angiosperm View MSA
122332400 5261 Brassicaceae Singleton cluster - no MSA
123773475 5264 Brassicales-Malvales Singleton cluster - no MSA
124271957 5266 SBM Singleton cluster - no MSA
124249661 5268 Malvidae View MSA
124038279 5270 Rosid View MSA
123610729 5271 Pentapetalae View MSA
122645323 5272 Eudicot View MSA
120929147 5274 Embryophyte View MSA
123428151 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain