Gene : Cagra.1508s0058 C. grandiflora v1.1
Defline:  (1 of 7) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) Genomic Order:  58
Name:  ? Cagra.1508s0058 Secondary Identifier:  ? PAC:28905868
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0058 0.5kb upstream 0.5kb upstream 1861 true Scaffold1508: 248057-249917 Capsella grandiflora
Cagra.1508s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 248057-248556 Capsella grandiflora
Cagra.1508s0058 0.5kb downstream 0.5kb downstream 1861 true Scaffold1508: 248557-250417 Capsella grandiflora
Cagra.1508s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 249918-250417 Capsella grandiflora
Cagra.1508s0058 1.0kb upstream 1.0kb upstream 2361 true Scaffold1508: 247557-249917 Capsella grandiflora
Cagra.1508s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 247557-248556 Capsella grandiflora
Cagra.1508s0058 1.0kb downstream 1.0kb downstream 2361 true Scaffold1508: 248557-250917 Capsella grandiflora
Cagra.1508s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 249918-250917 Capsella grandiflora
Cagra.1508s0058 2.0kb upstream 2.0kb upstream 3361 true Scaffold1508: 246557-249917 Capsella grandiflora
Cagra.1508s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 246557-248556 Capsella grandiflora
Cagra.1508s0058 2.0kb downstream 2.0kb downstream 3361 true Scaffold1508: 248557-251917 Capsella grandiflora
Cagra.1508s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 249918-251917 Capsella grandiflora
Cagra.1508s0058 5.0kb upstream 5.0kb upstream 6361 true Scaffold1508: 243557-249917 Capsella grandiflora
Cagra.1508s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 243557-248556 Capsella grandiflora
Cagra.1508s0058 5.0kb downstream 5.0kb downstream 6361 true Scaffold1508: 248557-254917 Capsella grandiflora
Cagra.1508s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 249918-254917 Capsella grandiflora
Cagra.1508s0058 10.0kb upstream 10.0kb upstream 11361 true Scaffold1508: 238557-249917 Capsella grandiflora
Cagra.1508s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 238557-248556 Capsella grandiflora
Cagra.1508s0058 10.0kb downstream 10.0kb downstream 11361 true Scaffold1508: 248557-259917 Capsella grandiflora
Cagra.1508s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 249918-259917 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
122374606 5261 Brassicaceae View MSA
123837115 5264 Brassicales-Malvales View MSA
124349977 5266 SBM View MSA
124250054 5268 Malvidae View MSA
124062701 5270 Rosid View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain