Protein Family : related to ubiquitin 1 124349977

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  29
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29 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g040824m.g (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sinensis v1.1 1766   scaffold00097: 53662-55427
orange1.1g048350m.g (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sinensis v1.1 360   scaffold00191: 230978-231337
AT1G31340 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 RUB1 1614   Chr1: 11217845-11219458
AT2G35635 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 UBQ7 1147   Chr2: 14980970-14982116
Thhalv10017351m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 1421   scaffold_10: 8289779-8291199
Thhalv10008986m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 1851   scaffold_5: 3597669-3599519
Ciclev10013001m.g (1 of 2) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. clementina v1.0 2160   scaffold_6: 9949967-9952126
Ciclev10006134m.g (1 of 2) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. clementina v1.0 3286   scaffold_9: 29407888-29411173
Gorai.012G038400 (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) G. raimondii v2.1 2579   Chr12: 4806125-4808703
Gorai.N024400 (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) G. raimondii v2.1 1877   scaffold_524: 4202-6078
Gorai.N024300 (1 of 11) KOG0005 - Ubiquitin-like protein G. raimondii v2.1 2185   scaffold_524: 260-2444
Thecc1EG001647 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) T. cacao v1.1 2043   scaffold_1: 8515180-8517222
Thecc1EG032944 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) T. cacao v1.1 1913   scaffold_7: 16292353-16294265
Thecc1EG032940 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) T. cacao v1.1 46824   scaffold_7: 16247476-16294299
Araha.14123s0001 (1 of 11) KOG0005 - Ubiquitin-like protein A. halleri v1.1 1297   Scaffold14123: 3-1299
Araha.17083s0011 (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) A. halleri v1.1 1373   Scaffold17083: 50261-51633
Cagra.0993s0074 (1 of 7) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. grandiflora v1.1 1067   Scaffold993: 253592-254658
Cagra.1508s0058 (1 of 7) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. grandiflora v1.1 1361   Scaffold1508: 248557-249917
Cagra.22721s0001 (1 of 7) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. grandiflora v1.1 977   Scaffold22721: 1147-2123
Brara.G00545 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) B. rapa FPsc v1.3 962   A07: 6929447-6930408
Brara.H00721 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) B. rapa FPsc v1.3 1080   A08: 9390505-9391584
Brara.E00879 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) B. rapa FPsc v1.3 1020   A05: 5162952-5163971
Bostr.15697s0449 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) B. stricta v1.2 1772   Scaffold15697: 2969510-2971281
Bostr.23794s0535 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) B. stricta v1.2 1284   Scaffold23794: 3106747-3108030
AL1G49690 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. lyrata v2.1 1453   scaffold_1: 16744696-16746148
AL4G31710 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. lyrata v2.1 1255   scaffold_4: 16907759-16909013
Carub.0004s1735 (1 of 2) K12158 - ubiquitin-like protein Nedd8 (NEDD8) C. rubella v1.1 1230   scaffold_4: 9915866-9917095
Carub.0001s2979 (1 of 2) K12158 - ubiquitin-like protein Nedd8 (NEDD8) C. rubella v1.1 1319   scaffold_1: 10962352-10963670
Carub.0007s3092 (1 of 1) PTHR10666//PTHR10666:SF120 - UBIQUITIN // POLYUBIQUITIN 8-RELATED C. rubella v1.1 456   scaffold_7: 13460030-13460485

29 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g048350m C. sinensis v1.1 124349977 related to ubiquitin 1 2 5266 SBM
orange1.1g040824m C. sinensis v1.1 124349977 related to ubiquitin 1 2 5266 SBM
Gorai.012G038400.1 G. raimondii v2.1 124349977 related to ubiquitin 1 3 5266 SBM
Araha.17083s0011.1.p A. halleri v1.1 124349977 related to ubiquitin 1 2 5266 SBM
Araha.14123s0001.1.p A. halleri v1.1 124349977 related to ubiquitin 1 2 5266 SBM
Brara.H00721.1.p B. rapa FPsc v1.3 124349977 related to ubiquitin 1 3 5266 SBM
AL4G31710.t1 A. lyrata v2.1 124349977 related to ubiquitin 1 2 5266 SBM
AL1G49690.t1 A. lyrata v2.1 124349977 related to ubiquitin 1 2 5266 SBM
Carub.0007s3092.1.p C. rubella v1.1 124349977 related to ubiquitin 1 3 5266 SBM
AT2G35635.1 A. thaliana TAIR10 124349977 related to ubiquitin 1 2 5266 SBM
AT1G31340.1 A. thaliana TAIR10 124349977 related to ubiquitin 1 2 5266 SBM
Thhalv10017351m E. salsugineum v1.0 124349977 related to ubiquitin 1 2 5266 SBM
Thhalv10008986m E. salsugineum v1.0 124349977 related to ubiquitin 1 2 5266 SBM
Ciclev10013001m C. clementina v1.0 124349977 related to ubiquitin 1 2 5266 SBM
Ciclev10006134m C. clementina v1.0 124349977 related to ubiquitin 1 2 5266 SBM
Gorai.N024300.1 G. raimondii v2.1 124349977 related to ubiquitin 1 3 5266 SBM
Gorai.N024400.1 G. raimondii v2.1 124349977 related to ubiquitin 1 3 5266 SBM
Thecc1EG032944t1 T. cacao v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Thecc1EG032940t2 T. cacao v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Thecc1EG001647t1 T. cacao v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Cagra.1508s0058.1.p C. grandiflora v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Cagra.0993s0074.1.p C. grandiflora v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Cagra.22721s0001.1.p C. grandiflora v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Brara.E00879.1.p B. rapa FPsc v1.3 124349977 related to ubiquitin 1 3 5266 SBM
Brara.G00545.1.p B. rapa FPsc v1.3 124349977 related to ubiquitin 1 3 5266 SBM
Bostr.15697s0449.1.p B. stricta v1.2 124349977 related to ubiquitin 1 2 5266 SBM
Bostr.23794s0535.1.p B. stricta v1.2 124349977 related to ubiquitin 1 2 5266 SBM
Carub.0004s1735.1.p C. rubella v1.1 124349977 related to ubiquitin 1 3 5266 SBM
Carub.0001s2979.1.p C. rubella v1.1 124349977 related to ubiquitin 1 3 5266 SBM