Gene : Cagra.1508s0065 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22891:SF4 - PROTEIN ARGONAUTE 2-RELATED Genomic Order:  65
Name:  ? Cagra.1508s0065 Secondary Identifier:  ? PAC:28905709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0065 0.5kb upstream 0.5kb upstream 4308 true Scaffold1508: 284104-288411 Capsella grandiflora
Cagra.1508s0065 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 287912-288411 Capsella grandiflora
Cagra.1508s0065 0.5kb downstream 0.5kb downstream 4308 true Scaffold1508: 283604-287911 Capsella grandiflora
Cagra.1508s0065 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 283604-284103 Capsella grandiflora
Cagra.1508s0065 1.0kb upstream 1.0kb upstream 4808 true Scaffold1508: 284104-288911 Capsella grandiflora
Cagra.1508s0065 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 287912-288911 Capsella grandiflora
Cagra.1508s0065 1.0kb downstream 1.0kb downstream 4808 true Scaffold1508: 283104-287911 Capsella grandiflora
Cagra.1508s0065 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 283104-284103 Capsella grandiflora
Cagra.1508s0065 2.0kb upstream 2.0kb upstream 5808 true Scaffold1508: 284104-289911 Capsella grandiflora
Cagra.1508s0065 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 287912-289911 Capsella grandiflora
Cagra.1508s0065 2.0kb downstream 2.0kb downstream 5808 true Scaffold1508: 282104-287911 Capsella grandiflora
Cagra.1508s0065 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 282104-284103 Capsella grandiflora
Cagra.1508s0065 5.0kb upstream 5.0kb upstream 8808 true Scaffold1508: 284104-292911 Capsella grandiflora
Cagra.1508s0065 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 287912-292911 Capsella grandiflora
Cagra.1508s0065 5.0kb downstream 5.0kb downstream 8808 true Scaffold1508: 279104-287911 Capsella grandiflora
Cagra.1508s0065 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 279104-284103 Capsella grandiflora
Cagra.1508s0065 10.0kb upstream 10.0kb upstream 13808 true Scaffold1508: 284104-297911 Capsella grandiflora
Cagra.1508s0065 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 287912-297911 Capsella grandiflora
Cagra.1508s0065 10.0kb downstream 10.0kb downstream 13808 true Scaffold1508: 274104-287911 Capsella grandiflora
Cagra.1508s0065 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 274104-284103 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332635 5261 Brassicaceae Singleton cluster - no MSA
123841261 5264 Brassicales-Malvales View MSA
124336671 5266 SBM View MSA
124249828 5268 Malvidae View MSA
124060672 5270 Rosid View MSA
123745241 5271 Pentapetalae View MSA
122793461 5272 Eudicot View MSA
122049484 5273 Angiosperm View MSA
121311429 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain