Gene : Cagra.1508s0064 C. grandiflora v1.1
Defline:  (1 of 1) KOG1041 - Translation initiation factor 2C (eIF-2C) and related proteins Genomic Order:  64
Name:  ? Cagra.1508s0064 Secondary Identifier:  ? PAC:28905848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0064 0.5kb upstream 0.5kb upstream 3783 true Scaffold1508: 278420-282202 Capsella grandiflora
Cagra.1508s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 281703-282202 Capsella grandiflora
Cagra.1508s0064 0.5kb downstream 0.5kb downstream 3783 true Scaffold1508: 277920-281702 Capsella grandiflora
Cagra.1508s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 277920-278419 Capsella grandiflora
Cagra.1508s0064 1.0kb upstream 1.0kb upstream 4283 true Scaffold1508: 278420-282702 Capsella grandiflora
Cagra.1508s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 281703-282702 Capsella grandiflora
Cagra.1508s0064 1.0kb downstream 1.0kb downstream 4283 true Scaffold1508: 277420-281702 Capsella grandiflora
Cagra.1508s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 277420-278419 Capsella grandiflora
Cagra.1508s0064 2.0kb upstream 2.0kb upstream 5283 true Scaffold1508: 278420-283702 Capsella grandiflora
Cagra.1508s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 281703-283702 Capsella grandiflora
Cagra.1508s0064 2.0kb downstream 2.0kb downstream 5283 true Scaffold1508: 276420-281702 Capsella grandiflora
Cagra.1508s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 276420-278419 Capsella grandiflora
Cagra.1508s0064 5.0kb upstream 5.0kb upstream 8283 true Scaffold1508: 278420-286702 Capsella grandiflora
Cagra.1508s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 281703-286702 Capsella grandiflora
Cagra.1508s0064 5.0kb downstream 5.0kb downstream 8283 true Scaffold1508: 273420-281702 Capsella grandiflora
Cagra.1508s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 273420-278419 Capsella grandiflora
Cagra.1508s0064 10.0kb upstream 10.0kb upstream 13283 true Scaffold1508: 278420-291702 Capsella grandiflora
Cagra.1508s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 281703-291702 Capsella grandiflora
Cagra.1508s0064 10.0kb downstream 10.0kb downstream 13283 true Scaffold1508: 268420-281702 Capsella grandiflora
Cagra.1508s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 268420-278419 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332647 5261 Brassicaceae Singleton cluster - no MSA
123773697 5264 Brassicales-Malvales Singleton cluster - no MSA
124272169 5266 SBM Singleton cluster - no MSA
124249828 5268 Malvidae View MSA
124060672 5270 Rosid View MSA
123745241 5271 Pentapetalae View MSA
122793461 5272 Eudicot View MSA
122049484 5273 Angiosperm View MSA
121311429 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain