Gene : Cagra.1508s0089 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  89
Name:  ? Cagra.1508s0089 Secondary Identifier:  ? PAC:28905819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0089 0.5kb upstream 0.5kb upstream 3196 true Scaffold1508: 376090-379285 Capsella grandiflora
Cagra.1508s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 376090-376589 Capsella grandiflora
Cagra.1508s0089 0.5kb downstream 0.5kb downstream 3196 true Scaffold1508: 376590-379785 Capsella grandiflora
Cagra.1508s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 379286-379785 Capsella grandiflora
Cagra.1508s0089 1.0kb upstream 1.0kb upstream 3696 true Scaffold1508: 375590-379285 Capsella grandiflora
Cagra.1508s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 375590-376589 Capsella grandiflora
Cagra.1508s0089 1.0kb downstream 1.0kb downstream 3696 true Scaffold1508: 376590-380285 Capsella grandiflora
Cagra.1508s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 379286-380285 Capsella grandiflora
Cagra.1508s0089 2.0kb upstream 2.0kb upstream 4696 true Scaffold1508: 374590-379285 Capsella grandiflora
Cagra.1508s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 374590-376589 Capsella grandiflora
Cagra.1508s0089 2.0kb downstream 2.0kb downstream 4696 true Scaffold1508: 376590-381285 Capsella grandiflora
Cagra.1508s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 379286-381285 Capsella grandiflora
Cagra.1508s0089 5.0kb upstream 5.0kb upstream 7696 true Scaffold1508: 371590-379285 Capsella grandiflora
Cagra.1508s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 371590-376589 Capsella grandiflora
Cagra.1508s0089 5.0kb downstream 5.0kb downstream 7696 true Scaffold1508: 376590-384285 Capsella grandiflora
Cagra.1508s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 379286-384285 Capsella grandiflora
Cagra.1508s0089 10.0kb upstream 10.0kb upstream 12696 true Scaffold1508: 366590-379285 Capsella grandiflora
Cagra.1508s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 366590-376589 Capsella grandiflora
Cagra.1508s0089 10.0kb downstream 10.0kb downstream 12696 true Scaffold1508: 376590-389285 Capsella grandiflora
Cagra.1508s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 379286-389285 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379537 5261 Brassicaceae View MSA
123834444 5264 Brassicales-Malvales View MSA
124339643 5266 SBM View MSA
124252918 5268 Malvidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain