Gene : Cagra.1508s0110 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31235:SF8 - PEROXIDASE 7 Genomic Order:  110
Name:  ? Cagra.1508s0110 Secondary Identifier:  ? PAC:28905837
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0110 0.5kb upstream 0.5kb upstream 1845 true Scaffold1508: 441660-443504 Capsella grandiflora
Cagra.1508s0110 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 443005-443504 Capsella grandiflora
Cagra.1508s0110 0.5kb downstream 0.5kb downstream 1845 true Scaffold1508: 441160-443004 Capsella grandiflora
Cagra.1508s0110 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 441160-441659 Capsella grandiflora
Cagra.1508s0110 1.0kb upstream 1.0kb upstream 2345 true Scaffold1508: 441660-444004 Capsella grandiflora
Cagra.1508s0110 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 443005-444004 Capsella grandiflora
Cagra.1508s0110 1.0kb downstream 1.0kb downstream 2345 true Scaffold1508: 440660-443004 Capsella grandiflora
Cagra.1508s0110 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 440660-441659 Capsella grandiflora
Cagra.1508s0110 2.0kb upstream 2.0kb upstream 3345 true Scaffold1508: 441660-445004 Capsella grandiflora
Cagra.1508s0110 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 443005-445004 Capsella grandiflora
Cagra.1508s0110 2.0kb downstream 2.0kb downstream 3345 true Scaffold1508: 439660-443004 Capsella grandiflora
Cagra.1508s0110 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 439660-441659 Capsella grandiflora
Cagra.1508s0110 5.0kb upstream 5.0kb upstream 6345 true Scaffold1508: 441660-448004 Capsella grandiflora
Cagra.1508s0110 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 443005-448004 Capsella grandiflora
Cagra.1508s0110 5.0kb downstream 5.0kb downstream 6345 true Scaffold1508: 436660-443004 Capsella grandiflora
Cagra.1508s0110 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 436660-441659 Capsella grandiflora
Cagra.1508s0110 10.0kb upstream 10.0kb upstream 11345 true Scaffold1508: 441660-453004 Capsella grandiflora
Cagra.1508s0110 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 443005-453004 Capsella grandiflora
Cagra.1508s0110 10.0kb downstream 10.0kb downstream 11345 true Scaffold1508: 431660-443004 Capsella grandiflora
Cagra.1508s0110 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 431660-441659 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361049 5261 Brassicaceae View MSA
123829210 5264 Brassicales-Malvales View MSA
124347313 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain