Gene : Cagra.1504s0047 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24031:SF2 - ATP-DEPENDENT RNA HELICASE DDX55 Genomic Order:  47
Name:  ? Cagra.1504s0047 Secondary Identifier:  ? PAC:28910242
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1504s0047 0.5kb upstream 0.5kb upstream 3845 true Scaffold1504: 152136-155980 Capsella grandiflora
Cagra.1504s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold1504: 152136-152635 Capsella grandiflora
Cagra.1504s0047 0.5kb downstream 0.5kb downstream 3845 true Scaffold1504: 152636-156480 Capsella grandiflora
Cagra.1504s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold1504: 155981-156480 Capsella grandiflora
Cagra.1504s0047 1.0kb upstream 1.0kb upstream 4345 true Scaffold1504: 151636-155980 Capsella grandiflora
Cagra.1504s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold1504: 151636-152635 Capsella grandiflora
Cagra.1504s0047 1.0kb downstream 1.0kb downstream 4345 true Scaffold1504: 152636-156980 Capsella grandiflora
Cagra.1504s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold1504: 155981-156980 Capsella grandiflora
Cagra.1504s0047 2.0kb upstream 2.0kb upstream 5345 true Scaffold1504: 150636-155980 Capsella grandiflora
Cagra.1504s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold1504: 150636-152635 Capsella grandiflora
Cagra.1504s0047 2.0kb downstream 2.0kb downstream 5345 true Scaffold1504: 152636-157980 Capsella grandiflora
Cagra.1504s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold1504: 155981-157980 Capsella grandiflora
Cagra.1504s0047 5.0kb upstream 5.0kb upstream 8345 true Scaffold1504: 147636-155980 Capsella grandiflora
Cagra.1504s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold1504: 147636-152635 Capsella grandiflora
Cagra.1504s0047 5.0kb downstream 5.0kb downstream 8345 true Scaffold1504: 152636-160980 Capsella grandiflora
Cagra.1504s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold1504: 155981-160980 Capsella grandiflora
Cagra.1504s0047 10.0kb upstream 10.0kb upstream 13345 true Scaffold1504: 142636-155980 Capsella grandiflora
Cagra.1504s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold1504: 142636-152635 Capsella grandiflora
Cagra.1504s0047 10.0kb downstream 10.0kb downstream 13345 true Scaffold1504: 152636-165980 Capsella grandiflora
Cagra.1504s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold1504: 155981-165980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373167 5261 Brassicaceae View MSA
123830006 5264 Brassicales-Malvales View MSA
124339967 5266 SBM View MSA
124243555 5268 Malvidae View MSA
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain