Gene : Cagra.1472s0004 C. grandiflora v1.1
Defline:  (1 of 2) PF07460 - NUMOD3 motif (2 copies) (NUMOD3) Genomic Order:  4
Name:  ? Cagra.1472s0004 Secondary Identifier:  ? PAC:28904810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1472s0004 0.5kb upstream 0.5kb upstream 2247 true Scaffold1472: 10387-12633 Capsella grandiflora
Cagra.1472s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1472: 12134-12633 Capsella grandiflora
Cagra.1472s0004 0.5kb downstream 0.5kb downstream 2247 true Scaffold1472: 9887-12133 Capsella grandiflora
Cagra.1472s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1472: 9887-10386 Capsella grandiflora
Cagra.1472s0004 1.0kb upstream 1.0kb upstream 2747 true Scaffold1472: 10387-13133 Capsella grandiflora
Cagra.1472s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1472: 12134-13133 Capsella grandiflora
Cagra.1472s0004 1.0kb downstream 1.0kb downstream 2747 true Scaffold1472: 9387-12133 Capsella grandiflora
Cagra.1472s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1472: 9387-10386 Capsella grandiflora
Cagra.1472s0004 2.0kb upstream 2.0kb upstream 3747 true Scaffold1472: 10387-14133 Capsella grandiflora
Cagra.1472s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1472: 12134-14133 Capsella grandiflora
Cagra.1472s0004 2.0kb downstream 2.0kb downstream 3747 true Scaffold1472: 8387-12133 Capsella grandiflora
Cagra.1472s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1472: 8387-10386 Capsella grandiflora
Cagra.1472s0004 5.0kb upstream 5.0kb upstream 6747 true Scaffold1472: 10387-17133 Capsella grandiflora
Cagra.1472s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1472: 12134-17133 Capsella grandiflora
Cagra.1472s0004 5.0kb downstream 5.0kb downstream 6747 true Scaffold1472: 5387-12133 Capsella grandiflora
Cagra.1472s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1472: 5387-10386 Capsella grandiflora
Cagra.1472s0004 10.0kb upstream 10.0kb upstream 11747 true Scaffold1472: 10387-22133 Capsella grandiflora
Cagra.1472s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1472: 12134-22133 Capsella grandiflora
Cagra.1472s0004 10.0kb downstream 10.0kb downstream 11747 true Scaffold1472: 387-12133 Capsella grandiflora
Cagra.1472s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1472: 387-10386 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377865 5261 Brassicaceae View MSA
123828495 5264 Brassicales-Malvales View MSA
124341605 5266 SBM View MSA
124244424 5268 Malvidae View MSA
124067823 5270 Rosid View MSA
123741398 5271 Pentapetalae View MSA
122790340 5272 Eudicot View MSA
122047787 5273 Angiosperm View MSA
121349375 5274 Embryophyte View MSA
123428133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain